PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439700.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 340aa    MW: 38672.2 Da    PI: 4.7298
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08155197855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er+RR+ +++++  Lr l+P+      +K++K +i   Av Y+++Lq
  XP_026439700.1 155 SERKRRSWMKQKLYSLRALVPNI-----TKMDKTSIIGDAVSYVQDLQ 197
                     5*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDDLRAHEPS NIQSNDFDQD FAIIENFEEF MDQIREDFDK PISNYASIYC DSHQQVIDNE  60
LMYFLDGAKY NNQFLSTPEY LFEYNQHGSA SNISGCNIVS DPNLLPSIGS VKIDGLLEEE  120
ENDRDDYSSG NTNTPRPSSS LKRSTSTLLV DGSSSERKRR SWMKQKLYSL RALVPNITKM  180
DKTSIIGDAV SYVQDLQMQA EKLRFEITNL ESSSANKRES ILNLVESPKK NQTPGHKNMH  240
QSCKKIVKMD VFQVDESLFH VRIVCNKGEG VALFVYKALE SLTSSDVQSS NFRTYPERVA  300
FTFMVNLREC AEKTVELSNL TTCLNSALLD QGFEYKLSNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-52bHLH family protein