PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439464.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 346aa    MW: 39688.2 Da    PI: 4.6335
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.3e-09168209955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ErrRR ++++ + +Lr l+P+      +K++Ka+i   Av Y+++Lq
  XP_026439464.1 168 ERRRRVQMKHNLYTLRALVPNI-----TKMDKASIIGDAVSYVQDLQ 209
                     9********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MDISNLQPFQ QQTSNMHSSD FDLHEFINHV SFEEFIDQVR EDFVEPIIDY GTNYYHGNFH  60
QQQQVDNELM YFNDGARYNK NQLFPTPGDL FELINNYSAA GSTTTTTSDP ISLNPMPSFG  120
SIDIDAVLEE DEENEGDDYS SGTTSTRPSS SSSKRNSSVD NSRILGTERR RRVQMKHNLY  180
TLRALVPNIT KMDKASIIGD AVSYVQDLQK EAKRLKTEIA ELEPTLTNQI EKYKNLVENP  240
EKNRTSDWNK EHQICKKIVK MDVFQVEENE FYVRIICNKG DGVAVYLYKA LESLTSFDVQ  300
SSKFATFPDK LDFTFTLNVK ECGGKMMNLS NMKLWLNEAL LNQGFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-62bHLH family protein