PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026439353.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 380aa MW: 41973.7 Da PI: 6.0378

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026439353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00051	238	276	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq XP_026439353.1 238 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 276 6677889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MNRGFLESLP VQQMMMSAGN PNWWNINNTV KPPPLIHPQL QPNPSTTSLL PQYPPSSLPL 60 NFLENDHNHQ ELPESWCQLL MGGSPIVEEG DERLGLSNQY NQQVKKLENW EEQILYPSEA 120 NDNNSSIVDH VKQEVSESAA YAYGLVSNGE FQTSNGRVVP NWSPHHQVMP VSSPSSCVTS 180 FSSNSMLDFS TTKSDNNHGT KHHPQPDHSS ECNSTATGGA FKKARVQQSS TQSTFKVRKE 240 KLGDRITALH QLVSPFGKTD TASVLLEAIG YIRFLQNQIE ALSLPYLGSG SGNMNQQLQH 300 QQQSVQGEKN CIFPEDPGQL LHVDTNNMKR RGVPDQDSEN APKMDLRSRG LCLVPLACTL 360 QVGSDNGADF WAPTLGGGFR

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MNRGFLESLP VQQMMMSAGN PNWWNINNTV KPPPLIHPQL QPNPSTTSLL PQYPPSSLPL  60
NFLENDHNHQ ELPESWCQLL MGGSPIVEEG DERLGLSNQY NQQVKKLENW EEQILYPSEA  120
NDNNSSIVDH VKQEVSESAA YAYGLVSNGE FQTSNGRVVP NWSPHHQVMP VSSPSSCVTS  180
FSSNSMLDFS TTKSDNNHGT KHHPQPDHSS ECNSTATGGA FKKARVQQSS TQSTFKVRKE  240
KLGDRITALH QLVSPFGKTD TASVLLEAIG YIRFLQNQIE ALSLPYLGSG SGNMNQQLQH  300
QQQSVQGEKN CIFPEDPGQL LHVDTNNMKR RGVPDQDSEN APKMDLRSRG LCLVPLACTL  360
QVGSDNGADF WAPTLGGGFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	4e-85	bHLH family protein