PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026439295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 207aa MW: 23358.6 Da PI: 6.5153 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 48.7 | 9.6e-16 | 9 | 59 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHH.HT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvL.Cdaevaviifsstgklyeys 50 +ri + +r vtfskRr+gi KA EL+ L d+ v++i+fs+ gk y++ XP_026439295.1 9 ERIVDPQKRMVTFSKRREGIKSKATELCRLfADIIVCIIVFSPGGKAYTFT 59 5788999*********************8868*****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MGQKKIEIER IVDPQKRMVT FSKRREGIKS KATELCRLFA DIIVCIIVFS PGGKAYTFTN 60 SPVGVCNMVQ RFLEEQRKGK KQESENVHRS KNSTQCRNKA GVGNGSIDSF WWDNIDNEEL 120 DSVEKLKSVK QSLEKLKQNL CARKEVLIAS SSSSSSSTIE DLIIDEDCII EDRIVEDAAT 180 TITEKHEARE ACCKDQPNLD LSLNLGW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61120.1 | 2e-13 | MIKC_MADS family protein |