PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438969.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 398aa MW: 43056.8 Da PI: 8.9996

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82	5.2e-26	151	194	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_026438969.1 151 DPEPGRCRRTDGKKWRCSRDVVPGQKYCERHVHRGRNRSRKPVE 194 79***************************************987 PP
2	QLQ	45	3.3e-16	79	113	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 F+ +Q+q+L+ Q+l++Ky++a++ +P+eLl i+ XP_026438969.1 79 LFSISQWQELELQALIFKYMLAGAVIPSELLHSIK 113 6999**************************98885 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEYDHLNQWR NQQRQLEQGS AAKIPRIGVD SDHTETALPL FVPEPSAVKI SSLSAFPDSL 60 TTTAVASPYN RFPRLGGGLF SISQWQELEL QALIFKYMLA GAVIPSELLH SIKTSFINAP 120 SCCHYPHQQL YQHYQPAAMM QSGYWGRGSM DPEPGRCRRT DGKKWRCSRD VVPGQKYCER 180 HVHRGRNRSR KPVEIPTPAA GVGNGGGGGG LRIANATIAS SPASMMSGGS NFSLSGSPSI 240 ELLHLNQRSS ENRVGNHDNN MSGEAKPDGQ VLRHFFDDWP RSNQKSNGGL GNNSSPATST 300 TCLSISTPGN NPSSDFSLKL STGNVDERDQ SREMNGGGAE RRQMNWGGGW GTHQMSSMGG 360 GPLAEALRSS SITNSSSPTS VLHELRRGSI SETSSVST

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEYDHLNQWR NQQRQLEQGS AAKIPRIGVD SDHTETALPL FVPEPSAVKI SSLSAFPDSL  60
TTTAVASPYN RFPRLGGGLF SISQWQELEL QALIFKYMLA GAVIPSELLH SIKTSFINAP  120
SCCHYPHQQL YQHYQPAAMM QSGYWGRGSM DPEPGRCRRT DGKKWRCSRD VVPGQKYCER  180
HVHRGRNRSR KPVEIPTPAA GVGNGGGGGG LRIANATIAS SPASMMSGGS NFSLSGSPSI  240
ELLHLNQRSS ENRVGNHDNN MSGEAKPDGQ VLRHFFDDWP RSNQKSNGGL GNNSSPATST  300
TCLSISTPGN NPSSDFSLKL STGNVDERDQ SREMNGGGAE RRQMNWGGGW GTHQMSSMGG  360
GPLAEALRSS SITNSSSPTS VLHELRRGSI SETSSVST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-71	GRF family protein