PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438811.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 782aa MW: 90124.8 Da PI: 7.2825

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.8	7.3e-08	2	35	59	91
FAR1 59 rtgCkaklkvkkek.dgkwevtkleleHnHelap 91 rtgC+a+l++ +++ ++w+v++++ +HnH+++p XP_026438811.1 2 RTGCEAMLRIALNTkCNTWYVNEFKDHHNHDMVP 35 8**********989************9975 PP
2	FAR1	77.8	2.1e-24	130	223	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fY+eY++++GFs+rk++s+ + r +it+ fvC +eg ++++ ++ + k++r++++ rtgC+a++++ +++ +g+w+v+ ++ +HnH+++p XP_026438811.1 130 FYKEYGRSMGFSTRKRSSYATGRGPQITRVIFVCRCEGIHKKQVDSsddDGKKKRNTTSMRTGCEAMIRIALNTkHGTWYVNAFKDDHNHDMVP 223 9************************************9999888777889999**************99*************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MRTGCEAMLR IALNTKCNTW YVNEFKDHHN HDMVPPRKQV FMKSNKVFPP ATTNLAEASS 60 KHTVQAGVVA SLFEDNSERT TTLDAGSVHS EMAATFDVGS VHNDTTTNFD VESVPILDME 120 FHFIEEAGAF YKEYGRSMGF STRKRSSYAT GRGPQITRVI FVCRCEGIHK KQVDSSDDDG 180 KKKRNTTSMR TGCEAMIRIA LNTKHGTWYV NAFKDDHNHD MVPPEEGVLM KSNKDFPPAP 240 RNLAKAPSKR RLQLRKVGPP FGDNENTEST PRDVYNHLRT IRESLIEVGD AEAVMIYFRK 300 KTIENPGFYY AVQVDEEGRA ASFFWVDARS RIAYSRFGDA VTFDTTCRAN KYSMPFAPFT 360 GTNHYHQSVT FGFALLRDET EETFTWLFKT WLEATGGNPP ISILTDQDQD MTSAIATVFL 420 SSRHCFCSGH IKKKFGEKLS HVFYKKSKFK KTVKAVTRFT YTTQEFENQW EAMLREFGLV 480 EDVWLHDLFE IREKWIPAYN RGTFFAGMNS TQRSDSIISF FDHSVNSRTC LLEFVESCGQ 540 ALERMYIRER YEDYKSIHVK RIFASQDLLV KHASPIYTKN MFMKVHEQFN ASSRYRSEAI 600 EADGDEETYR VYSLNDEVPM EQFRVKINKV TQKGVCGCQE YEFIGISCRH LHHILVYRYY 660 VVEIPSHFIK QRWTKYANRP SVLGNDELLM KDHKLGTEAM RISHYCRRST ELAYILGKSK 720 KAYDVTMGFL DQAFEKVKEI DIDELGAEYG KDGQLEEYAN DEPSETENSC DAAEITRRRV 780 MC

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MRTGCEAMLR IALNTKCNTW YVNEFKDHHN HDMVPPRKQV FMKSNKVFPP ATTNLAEASS  60
KHTVQAGVVA SLFEDNSERT TTLDAGSVHS EMAATFDVGS VHNDTTTNFD VESVPILDME  120
FHFIEEAGAF YKEYGRSMGF STRKRSSYAT GRGPQITRVI FVCRCEGIHK KQVDSSDDDG  180
KKKRNTTSMR TGCEAMIRIA LNTKHGTWYV NAFKDDHNHD MVPPEEGVLM KSNKDFPPAP  240
RNLAKAPSKR RLQLRKVGPP FGDNENTEST PRDVYNHLRT IRESLIEVGD AEAVMIYFRK  300
KTIENPGFYY AVQVDEEGRA ASFFWVDARS RIAYSRFGDA VTFDTTCRAN KYSMPFAPFT  360
GTNHYHQSVT FGFALLRDET EETFTWLFKT WLEATGGNPP ISILTDQDQD MTSAIATVFL  420
SSRHCFCSGH IKKKFGEKLS HVFYKKSKFK KTVKAVTRFT YTTQEFENQW EAMLREFGLV  480
EDVWLHDLFE IREKWIPAYN RGTFFAGMNS TQRSDSIISF FDHSVNSRTC LLEFVESCGQ  540
ALERMYIRER YEDYKSIHVK RIFASQDLLV KHASPIYTKN MFMKVHEQFN ASSRYRSEAI  600
EADGDEETYR VYSLNDEVPM EQFRVKINKV TQKGVCGCQE YEFIGISCRH LHHILVYRYY  660
VVEIPSHFIK QRWTKYANRP SVLGNDELLM KDHKLGTEAM RISHYCRRST ELAYILGKSK  720
KAYDVTMGFL DQAFEKVKEI DIDELGAEYG KDGQLEEYAN DEPSETENSC DAAEITRRRV  780
MC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-115	FAR1 family protein