PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438348.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 700aa MW: 77974.2 Da PI: 5.0298

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.4	5.9e-14	500	546	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_026438348.1 500 NHVLAERRRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQLK 546 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MAVAHQPPNS RLQTMLQSAV QAVQWTYSLF WQVCPQQGIL VWGDGYYNGA IKTRKTVQPV 60 EVSTEEASLQ RSQQLRELYE SLSAEETNQP TRRPCAALSP EDLTESEWFY LMSVSFSFPP 120 GVGLPGKAYT RQQHIWLTGA NETESKIFSR AILAKSAHIQ TVLCIPLLDG IIEFGTTDRV 180 QEDLGLIQYV KGFFTDYRHQ PTPARSEHST SNPASTSSEQ FNFNSTPGLL SAMYSAAHPI 240 PHSDDEEEEE EEDEEDEENG SESDSQAETG RNSYADAAAT AVVMQDPIHL CDPMIEGLVT 300 TTAERSELVQ HEMSEDIRIG SPDDVSNNNL DPEVRMFDIT HGSESGRKWS ADQLISGGDL 360 QIPNSDTPQN EELIHEDSHY SQTVSTILQQ NPNQWPDYTP TAALGGGYIG YTLSSSSSSS 420 TTSQSAFAKW SSQNNHLLHL PPPLDVTSSP PQWRLKYILF HVPYLHNKSR DESCTRSRDG 480 SEQGQNKLRK GASAEDLSAN HVLAERRRRE KLNERFIVLR SLVPFVTKMD KASILGDTIE 540 YVKQLKKKIQ ELELKNQSDI DQRMKNMVGF NVTSGGGSNQ MVHDPIGFPG SEKRKLRIVE 600 GNAGAKAKVL EGPLVIGNIV QVSIIESDAL LELRCLYKEG ILLEIMQTLR DLRLEITAVQ 660 SSSSNGIFVA ELRAKVKENY IGKKPTIMEV KKAIHQVLSH

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MAVAHQPPNS RLQTMLQSAV QAVQWTYSLF WQVCPQQGIL VWGDGYYNGA IKTRKTVQPV  60
EVSTEEASLQ RSQQLRELYE SLSAEETNQP TRRPCAALSP EDLTESEWFY LMSVSFSFPP  120
GVGLPGKAYT RQQHIWLTGA NETESKIFSR AILAKSAHIQ TVLCIPLLDG IIEFGTTDRV  180
QEDLGLIQYV KGFFTDYRHQ PTPARSEHST SNPASTSSEQ FNFNSTPGLL SAMYSAAHPI  240
PHSDDEEEEE EEDEEDEENG SESDSQAETG RNSYADAAAT AVVMQDPIHL CDPMIEGLVT  300
TTAERSELVQ HEMSEDIRIG SPDDVSNNNL DPEVRMFDIT HGSESGRKWS ADQLISGGDL  360
QIPNSDTPQN EELIHEDSHY SQTVSTILQQ NPNQWPDYTP TAALGGGYIG YTLSSSSSSS  420
TTSQSAFAKW SSQNNHLLHL PPPLDVTSSP PQWRLKYILF HVPYLHNKSR DESCTRSRDG  480
SEQGQNKLRK GASAEDLSAN HVLAERRRRE KLNERFIVLR SLVPFVTKMD KASILGDTIE  540
YVKQLKKKIQ ELELKNQSDI DQRMKNMVGF NVTSGGGSNQ MVHDPIGFPG SEKRKLRIVE  600
GNAGAKAKVL EGPLVIGNIV QVSIIESDAL LELRCLYKEG ILLEIMQTLR DLRLEITAVQ  660
SSSSNGIFVA ELRAKVKENY IGKKPTIMEV KKAIHQVLSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	505	510	ERRRRE
2	506	511	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	3e-94	bHLH family protein