PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438333.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 723aa MW: 78152.9 Da PI: 6.536

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.5	3.8e-14	304	363	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_026438333.1 304 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEDKAARAYDLAALKYWG 363 57*****************666664478446******99***********98 PP
2	AP2	46.6	8.3e-15	406	457	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026438333.1 406 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 457 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MASSMNNWLG FSLSPQEVVP TQSQTHHHAS NVSRHGFNSD EVSGSEVVSS DCFDLGSHDS 60 SGPTGAYGIL EAFNRNHQQQ HDWSDNNFKS SSELSMLMGG SSNNQHQHHL SHQEEPKLED 120 FLGGHSFSDH DQQKLHGYDH SGDYMFSNCS LQLPAATLSN SNGYGGSVAN NNNNNNNGSL 180 GLSMIKTWLR NQPAPPQQEN KDEGGNSTCG GGGGGDGVVG SNGQTLSLSM STGSQSSSPA 240 LPLVTTASTV VTGGGGSGGA ESSSSENNKQ KSNGTTTALD SPTAGAIVEA VPRKSIDTFG 300 QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQTRKGRQVY LGGYDKEDKA ARAYDLAALK 360 YWGSTTTTNF PIANYEQELE DMKNMTRQEY VASLRRKSSG FSRGASIYRG VTRHHQHGRW 420 QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VNSIMESSTL 480 PIGGAAKRLK EAEQIAEASV DARRAESDNL TSQLTNGMNN YGWPTIAFQQ AQPINMLYPS 540 YNQQRSGWCK QEQEAAVAAH SFQDLHQLQL GSTHHNFFQP SVLHNLMSQD SSSMEHSSGS 600 NSVIYNGGGG TGSGASNGSY QMGGSNGYIP MGMVMSSDHH QTNPTGSSFG ENDLKQQMGY 660 DSILSSNSTD PYSQGRNAYY MSQQSPPACN NWMPTGVQAL APRSNNIAVC HGAPSTFTVW 720 NDA

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MASSMNNWLG FSLSPQEVVP TQSQTHHHAS NVSRHGFNSD EVSGSEVVSS DCFDLGSHDS  60
SGPTGAYGIL EAFNRNHQQQ HDWSDNNFKS SSELSMLMGG SSNNQHQHHL SHQEEPKLED  120
FLGGHSFSDH DQQKLHGYDH SGDYMFSNCS LQLPAATLSN SNGYGGSVAN NNNNNNNGSL  180
GLSMIKTWLR NQPAPPQQEN KDEGGNSTCG GGGGGDGVVG SNGQTLSLSM STGSQSSSPA  240
LPLVTTASTV VTGGGGSGGA ESSSSENNKQ KSNGTTTALD SPTAGAIVEA VPRKSIDTFG  300
QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQTRKGRQVY LGGYDKEDKA ARAYDLAALK  360
YWGSTTTTNF PIANYEQELE DMKNMTRQEY VASLRRKSSG FSRGASIYRG VTRHHQHGRW  420
QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VNSIMESSTL  480
PIGGAAKRLK EAEQIAEASV DARRAESDNL TSQLTNGMNN YGWPTIAFQQ AQPINMLYPS  540
YNQQRSGWCK QEQEAAVAAH SFQDLHQLQL GSTHHNFFQP SVLHNLMSQD SSSMEHSSGS  600
NSVIYNGGGG TGSGASNGSY QMGGSNGYIP MGMVMSSDHH QTNPTGSSFG ENDLKQQMGY  660
DSILSSNSTD PYSQGRNAYY MSQQSPPACN NWMPTGVQAL APRSNNIAVC HGAPSTFTVW  720
NDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-128	AP2 family protein