PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026438314.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 449aa MW: 50093.2 Da PI: 9.2689

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026438314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	86.8	2e-27	205	266	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgynW+KYGqK++ g+++pr+YYrCt++ gC + k+v+rs++dp+++++tY+g+H+++ XP_026438314.1 205 LDDGYNWKKYGQKDILGAKYPRGYYRCTHRnvqGCIAIKQVQRSDKDPSYFTVTYQGRHTCT 266 59*************************98999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MESSSNTLSY WDLKPLIMNE LTQAKDLLKQ LQNDLDTSST STIASKLLVT KVICSFDNSV 60 SMLNRIKTDA QPTAASTTTT ATVISPPGVI NSMPIDSKVI DLTLTDKTPP PTAASAYRNQ 120 TTGSTTAAAG GAAGSIERPA SIFENNPPRS DSRSDYEYNN NNNNNNPRSD YESDIAKDQP 180 KKRKVLPRWT ENVRVCEQSG LEGPLDDGYN WKKYGQKDIL GAKYPRGYYR CTHRNVQGCI 240 AIKQVQRSDK DPSYFTVTYQ GRHTCTQASE DIPRNTSRSK HDQLNKCQDP KQKKTEVLIS 300 FQTSSRDKSV EEISFAKSCQ VRAKELSLQK PTQLPKALEI SIPKINLTKE ISNQQSSLAK 360 EFSIQKSSHT KEISNLQSCQ TKEISSLTKD FTLQRSSSAK DISNQQSCIT KEFSIEKRCH 420 AKEEDISIKK SCLTKADLNT KLELRLSSF

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MESSSNTLSY WDLKPLIMNE LTQAKDLLKQ LQNDLDTSST STIASKLLVT KVICSFDNSV  60
SMLNRIKTDA QPTAASTTTT ATVISPPGVI NSMPIDSKVI DLTLTDKTPP PTAASAYRNQ  120
TTGSTTAAAG GAAGSIERPA SIFENNPPRS DSRSDYEYNN NNNNNNPRSD YESDIAKDQP  180
KKRKVLPRWT ENVRVCEQSG LEGPLDDGYN WKKYGQKDIL GAKYPRGYYR CTHRNVQGCI  240
AIKQVQRSDK DPSYFTVTYQ GRHTCTQASE DIPRNTSRSK HDQLNKCQDP KQKKTEVLIS  300
FQTSSRDKSV EEISFAKSCQ VRAKELSLQK PTQLPKALEI SIPKINLTKE ISNQQSSLAK  360
EFSIQKSSHT KEISNLQSCQ TKEISSLTKD FTLQRSSSAK DISNQQSCIT KEFSIEKRCH  420
AKEEDISIKK SCLTKADLNT KLELRLSSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23810.1	2e-40	WRKY family protein