PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026437536.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 349aa    MW: 38259.6 Da    PI: 4.1121
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026437536.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09226267753
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                     + Er+RR+r+N+ f++Lr+++P       +K++K +iL  A  Y+++
  XP_026437536.1 226 MSERNRRKRLNKQFFTLRSMVPRI-----TKMDKRSILVDALTYLQD 267
                     67*********************7.....7**************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MEGLFEDDGE VETNNAADNL GNQYGAGDNM MMPMTNSSFS NGTGPEMLDE PADWYTQFSD  60
LHFPDNEPNG VQSDNHLLDV DDYLQENNVC LINQSIHDNE TWTVQAQADY GHHQPQSSTS  120
FIPPILGIDN DDDTGSPEHG QQLAVPQDPQ GSRGPQEHPS GLFQLPVQEP QNDALPGTAA  180
GNASVKEAAI THKNKNICSD DSDDDNDEDN IGDDNQLSSV ISKNLMSERN RRKRLNKQFF  240
TLRSMVPRIT KMDKRSILVD ALTYLQDILD QTNIEIKNQN HFSTAAIAGT DDPAHAAVKT  300
LRPPDSSTVN AEINHPPPHD QTGAVLLEKN AVDVNVEAGQ LQQIKATAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.12e-14bHLH family protein