PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026437529.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 421aa    MW: 47894.4 Da    PI: 4.6228
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026437529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS143.81.7e-44872572177
            GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     ++lLl++Aea++++d  la ++++ l+ +    ++g +++ +l+++ft++L+ + +++ +el +  + ++++     ++++a+++++e++P+lkf
  XP_026437529.1  87 TDLLLTAAEAIEAEDWLLAFTVIESLNSRltDRQNGeNSFMKLVFFFTQGLQYKSFNNAPELLHVPQIQKQT-----DSMSAFQMLQELTPYLKF 176
                     689************************99664445558*******************999999876666665.....8999************** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                     +h++aNqaIle ++++++vH+iDfd+++G+QWp+L+  LasR++   slRiT+v+  ++++   +++tg+rL++fA+++ +pf+
  XP_026437529.1 177 AHFAANQAILETTQEDQEVHVIDFDVMEGIQWPPLMIDLASRKGA--SLRITAVVG-DPKKMCYIQQTGRRLKEFADSIYLPFR 257
                     ******************************************776..9*****998.777999*******************95 PP
2GRAS45.51.3e-14263390225354
            GRAS 225 devLklvkslsPkvvvvveqeadhnse...sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWr 316
                     + +L+ +++lsPk+++++e+ ++ +++   sF++ f+ea+++y+al++sl +++    ++  k+ +e+++ +i + + +          ++++W+
  XP_026437529.1 263 ECFLNGLRKLSPKMIILTEELLNFSRTpamSFVDFFCEAFHHYTALYESLVTSFR-SYKAGLKMIEEVIELRILDSLKQFPCG----SSEKKSWE 352
                     569*****************98875544459*******************99984.446666666666*********999888....556788** PP

            GRAS 317 erlee.aGFkpvplsekaakqaklllrkvksdgyrveee 354
                     + +++  G+k++p+s+++++qak+l+  +   gy v++e
  XP_026437529.1 353 DGISAlKGYKAIPMSDHNVSQAKYLVGLFR-GGYWVQHE 390
                     ***9868**********************9.78988865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MEFDRVNDND NLSYPDGMFE VDSLLNFDHI HAHDQDTATG HLNLEKVDVD IKFCSEVNPG  60
VSECMDTVIV EETCHLKENI QEESSLTDLL LTAAEAIEAE DWLLAFTVIE SLNSRLTDRQ  120
NGENSFMKLV FFFTQGLQYK SFNNAPELLH VPQIQKQTDS MSAFQMLQEL TPYLKFAHFA  180
ANQAILETTQ EDQEVHVIDF DVMEGIQWPP LMIDLASRKG ASLRITAVVG DPKKMCYIQQ  240
TGRRLKEFAD SIYLPFRNFA SVECFLNGLR KLSPKMIILT EELLNFSRTP AMSFVDFFCE  300
AFHHYTALYE SLVTSFRSYK AGLKMIEEVI ELRILDSLKQ FPCGSSEKKS WEDGISALKG  360
YKAIPMSDHN VSQAKYLVGL FRGGYWVQHE RFPRSVTLSD SDPCKVSSQA QIDCCQPTAN  420
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.17e-31GRAS family protein