PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437353.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 495aa MW: 55126.8 Da PI: 8.4321

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.5	4.6e-15	168	227	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aaka++ a++k++g XP_026437353.1 168 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEDKAAKAYDLAALKYWG 227 78*****************655454478446******99***********98 PP
2	AP2	46.2	1.1e-14	272	321	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026437353.1 272 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 321 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MNIPPPTSTF MSTTTSHENH HQQEGHIDDN ITNPYLNYNV QQHYNINSNS NTNTMYHHHQ 60 VPLENATSIS GFKNWLRQGA PFPNDKSLII VDPINTHNPM HQNSSLSLSM NPVSSEPINP 120 NGNALCVQQQ QQQQSASTRK RSTVGKNGGV VREPVPRKSL DTFGQRTSQY RGVTRHRWTG 180 RYEAHLWDNS CRKEGQTRKG RQVYLGGYDK EDKAAKAYDL AALKYWGPTT HINFPLTVYE 240 KELEEMKHMN RQEFVASLRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG 300 TFSTQEEAAE AYDIAAIKFR GVSAVTNFDI SKYDVKRICA SSTLIGGDLA KRPSPQNSSS 360 VAAIENDSVV VPNLAIAIAE QPSDEFATIM WSSSSSEEQN QIPIEPNSSV RSMSMSNQNS 420 SNQASPKSSS VVSQSDQYDH TMGGGDYSSQ FTMNSAAESG PTSVDQVSAN WTTAGRESPN 480 ISVHHQLPMF ALWNE

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MNIPPPTSTF MSTTTSHENH HQQEGHIDDN ITNPYLNYNV QQHYNINSNS NTNTMYHHHQ  60
VPLENATSIS GFKNWLRQGA PFPNDKSLII VDPINTHNPM HQNSSLSLSM NPVSSEPINP  120
NGNALCVQQQ QQQQSASTRK RSTVGKNGGV VREPVPRKSL DTFGQRTSQY RGVTRHRWTG  180
RYEAHLWDNS CRKEGQTRKG RQVYLGGYDK EDKAAKAYDL AALKYWGPTT HINFPLTVYE  240
KELEEMKHMN RQEFVASLRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  300
TFSTQEEAAE AYDIAAIKFR GVSAVTNFDI SKYDVKRICA SSTLIGGDLA KRPSPQNSSS  360
VAAIENDSVV VPNLAIAIAE QPSDEFATIM WSSSSSEEQN QIPIEPNSSV RSMSMSNQNS  420
SNQASPKSSS VVSQSDQYDH TMGGGDYSSQ FTMNSAAESG PTSVDQVSAN WTTAGRESPN  480
ISVHHQLPMF ALWNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-111	AP2 family protein