PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436545.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 739aa MW: 79184 Da PI: 6.7988

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	489	535	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_026436545.1 489 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 535 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MPNSSSHLHH HRFSNKLDSS STTTTETQPT RMTYSSAATD LDFPPENEFV ELVCENGQIM 60 MQGQSGSRNR KNLSVGGFSS PSSKKDAAAG GGDVVNSKIG SKFGNMDAAA AANDFSAATG 120 GPSSAHHHIG GLNQDDDIGP WLSYPLEDSM QHDYGSDFFS ELTGVNLNSL SSSHQTHTAQ 180 SQNFGVVPFE IKNTSASYSQ MIRDSNFSTD TTTTTRPRSS SINQLECHNS NSSPRPRASD 240 FSSGDVHQAS YRCSKQTPEA AGKVLIPKMQ KQDQVPITST PLGLMNFSYF SRPAALVKAN 300 LQGISVAPSA GLSSIDRTGS KVKMSGFSSN PVESPLIDLT TSSRDVGGFQ NPPVQIVSKV 360 DIEPSTSNPA KELSSADQSG GISREDASRS TELTDKILRQ TSSFAASTNA ERPDTDKSVE 420 PPVASSSMCS GNSAGGTSND YKHSSKRKSR EVDESEYQSE DAEEESAGAR KQSNARGGSG 480 AKRTRAAEVH NLSERRRRDR INEKMRALQE LIPNCNKVDK ASMLDEAIEY LKTLQLQVQI 540 MSMGTGMYMP PMMLPTGMQR MPGQHMPHFP HMGVGMGMGM GFGMGMLDMG SGSSMMQVPP 600 MHNMQFPCPP LLGHNNFPTM PGSNLQMFGH PGRGMPMPMP HLPYAPPSEG PYTKSVPVPD 660 VPRTATPAEI PGPASKSSSK DTNLQVIQNA NIESQQNPKS QQGQEAGDGF KLSTLAQRSD 720 QSPPVVATEK STLPTGMGP

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MPNSSSHLHH HRFSNKLDSS STTTTETQPT RMTYSSAATD LDFPPENEFV ELVCENGQIM  60
MQGQSGSRNR KNLSVGGFSS PSSKKDAAAG GGDVVNSKIG SKFGNMDAAA AANDFSAATG  120
GPSSAHHHIG GLNQDDDIGP WLSYPLEDSM QHDYGSDFFS ELTGVNLNSL SSSHQTHTAQ  180
SQNFGVVPFE IKNTSASYSQ MIRDSNFSTD TTTTTRPRSS SINQLECHNS NSSPRPRASD  240
FSSGDVHQAS YRCSKQTPEA AGKVLIPKMQ KQDQVPITST PLGLMNFSYF SRPAALVKAN  300
LQGISVAPSA GLSSIDRTGS KVKMSGFSSN PVESPLIDLT TSSRDVGGFQ NPPVQIVSKV  360
DIEPSTSNPA KELSSADQSG GISREDASRS TELTDKILRQ TSSFAASTNA ERPDTDKSVE  420
PPVASSSMCS GNSAGGTSND YKHSSKRKSR EVDESEYQSE DAEEESAGAR KQSNARGGSG  480
AKRTRAAEVH NLSERRRRDR INEKMRALQE LIPNCNKVDK ASMLDEAIEY LKTLQLQVQI  540
MSMGTGMYMP PMMLPTGMQR MPGQHMPHFP HMGVGMGMGM GFGMGMLDMG SGSSMMQVPP  600
MHNMQFPCPP LLGHNNFPTM PGSNLQMFGH PGRGMPMPMP HLPYAPPSEG PYTKSVPVPD  660
VPRTATPAEI PGPASKSSSK DTNLQVIQNA NIESQQNPKS QQGQEAGDGF KLSTLAQRSD  720
QSPPVVATEK STLPTGMGP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	494	499	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	4e-44	bHLH family protein