PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436120.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 797aa MW: 90848.4 Da PI: 5.1797

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.1	9.7e-31	70	165	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r++++ + + k+rr r+ tr gCka+++v++++ gkw+v+kle+ HnHel XP_026436120.1 70 NFYNSYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRRDKRARkmdssdDAKRRRARPITREGCKAMMTVRRRDCGKWYVAKLEKTHNHEL 164 6**************************************999888899999999999*********************************9 PP FAR1 90 a 90 + XP_026436120.1 165 V 165 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MEKLSVELEK DMMDYVALED ATEECCVIED VEVPMVLDDT NKDDLSTCLA GGITQPTTDL 60 EFVSEDDARN FYNSYAKQMG FSIRVNSYYR SKKDNSIISR EFCCSKEGFR RDKRARKMDS 120 SDDAKRRRAR PITREGCKAM MTVRRRDCGK WYVAKLEKTH NHELVTPAMR HFLRSHRLEN 180 EPQKSLSSNY ESPEISTKNT GNLFTEECGV INKNGFPTQG ETNFIGKGRL STFGLDAQSL 240 LGFFKIMKAN DPAFFYAIQV DDEDRLSSVF WVDTRSRISY NCFSDVVAFD STYQVNQYKM 300 SVAPFTGVNH HKQSILFGCA LLADESESTF IWLFKTWLEA MSGRQPGLII TDNDITIRTA 360 VERVFPESCH RYCKWHILSK MPREMGQVYS ALPKTFQTEL DKCVNKSETG EEFELAWSSL 420 LDKYSLLGNE WLQSLYADCK LWAPAYLRDI FFAGMSATQR SESVNSLFDG YVNARTTIQD 480 FAEQYEKALN DRFEKEARAE FDTFYTKPVL KTPLPMEKQA ADIYTRKIFT VFQVEIFESL 540 VLAVKKSVDD GAITTYEVAR FDEERKAYFV AFNESEQVAS CSCKMFESEG ILCRHILAVF 600 RATNMFVLPS HYILKRWTRN AKDEAVSDLL PRVESQSDSR KAKNMQYNVL YQEAIKCAEE 660 GVASDHSFKV AFNALREARY KILNAKKNAF DASKVVTVVN TNDQIENMLD CQIDSSAYPT 720 TSPSLQQDNT EDSPTSNSNY KLVPEQPASS IATKCRSPGL DSCPCLWPKD TDPNSVTTDQ 780 ELEPIASHGV LESIPQS

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MEKLSVELEK DMMDYVALED ATEECCVIED VEVPMVLDDT NKDDLSTCLA GGITQPTTDL  60
EFVSEDDARN FYNSYAKQMG FSIRVNSYYR SKKDNSIISR EFCCSKEGFR RDKRARKMDS  120
SDDAKRRRAR PITREGCKAM MTVRRRDCGK WYVAKLEKTH NHELVTPAMR HFLRSHRLEN  180
EPQKSLSSNY ESPEISTKNT GNLFTEECGV INKNGFPTQG ETNFIGKGRL STFGLDAQSL  240
LGFFKIMKAN DPAFFYAIQV DDEDRLSSVF WVDTRSRISY NCFSDVVAFD STYQVNQYKM  300
SVAPFTGVNH HKQSILFGCA LLADESESTF IWLFKTWLEA MSGRQPGLII TDNDITIRTA  360
VERVFPESCH RYCKWHILSK MPREMGQVYS ALPKTFQTEL DKCVNKSETG EEFELAWSSL  420
LDKYSLLGNE WLQSLYADCK LWAPAYLRDI FFAGMSATQR SESVNSLFDG YVNARTTIQD  480
FAEQYEKALN DRFEKEARAE FDTFYTKPVL KTPLPMEKQA ADIYTRKIFT VFQVEIFESL  540
VLAVKKSVDD GAITTYEVAR FDEERKAYFV AFNESEQVAS CSCKMFESEG ILCRHILAVF  600
RATNMFVLPS HYILKRWTRN AKDEAVSDLL PRVESQSDSR KAKNMQYNVL YQEAIKCAEE  660
GVASDHSFKV AFNALREARY KILNAKKNAF DASKVVTVVN TNDQIENMLD CQIDSSAYPT  720
TSPSLQQDNT EDSPTSNSNY KLVPEQPASS IATKCRSPGL DSCPCLWPKD TDPNSVTTDQ  780
ELEPIASHGV LESIPQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein