PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436047.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

E2F/DP

Protein Properties

Length: 388aa MW: 43311.7 Da PI: 9.0228

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	64	2.1e-20	29	94	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f +l+ + + ++ln++a++L v +rRR YD++NV+ea++++ kk k ++ wkg XP_026436047.1 29 RKQKSLGLLCSNFFNLYDDDDVEFLNLNDAANRL---GV--ERRRMYDVVNVFEAIGVLVKKGKAQYYWKG 94 79**************9999********.....****************************98 PP
2	E2F_TDP	64.3	1.6e-20	169	252	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse..........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r++ksLr+lt++f+kll +s+ ++v l+++ak L+ + d k+RR+YDi+NVL++++liek + +++++w g XP_026436047.1 169 RSGKSLRQLTEEFVKLLLCSDGKVVALDQAAKILLMDannssetrcnDS--KVRRLYDIANVLSSVGLIEKthylnSGRPAFKWLG 252 689**************************************997544..9*****************999999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MKYQIQNQMN ESSTEEKKDF SNEEQSYNRK QKSLGLLCSN FFNLYDDDDV EFLNLNDAAN 60 RLGVERRRMY DVVNVFEAIG VLVKKGKAQY YWKGLGGIAN ALKEMKEEAL NDSLNILCVE 120 DGNETLVDQN TGSSSSQENL DVNSRIGALA AGSSLAKCSS SSSKNGGTRS GKSLRQLTEE 180 FVKLLLCSDG KVVALDQAAK ILLMDANNSS ETRCNDSKVR RLYDIANVLS SVGLIEKTHY 240 LNSGRPAFKW LGLQKETLPV SKKRIFGADL TNMSIRRNKT VSSMNLNSNS NNQEQDRYDL 300 AHRHNPFGFD PTKLPKADAS VKKTVTRSQA MLNLASTHIP PYRNQGLQGL FAHYTEAWGT 360 WYDEIGKKPR PEMKSSEFIS VPSALRSS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MKYQIQNQMN ESSTEEKKDF SNEEQSYNRK QKSLGLLCSN FFNLYDDDDV EFLNLNDAAN  60
RLGVERRRMY DVVNVFEAIG VLVKKGKAQY YWKGLGGIAN ALKEMKEEAL NDSLNILCVE  120
DGNETLVDQN TGSSSSQENL DVNSRIGALA AGSSLAKCSS SSSKNGGTRS GKSLRQLTEE  180
FVKLLLCSDG KVVALDQAAK ILLMDANNSS ETRCNDSKVR RLYDIANVLS SVGLIEKTHY  240
LNSGRPAFKW LGLQKETLPV SKKRIFGADL TNMSIRRNKT VSSMNLNSNS NNQEQDRYDL  300
AHRHNPFGFD PTKLPKADAS VKKTVTRSQA MLNLASTHIP PYRNQGLQGL FAHYTEAWGT  360
WYDEIGKKPR PEMKSSEFIS VPSALRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-74	E2F/DP family protein