PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435903.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 362aa MW: 41042.7 Da PI: 7.6074

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.2	2.1e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W+t ++ g+ R++k+c++rw +yl XP_026435903.1 14 KGPWTPEEDQKLVDYIQKHGHGSWRTLPKNAGLQRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.9	2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W+tIa++++ gRt++++k++w+++ XP_026435903.1 67 RGRFSFEEEETIIQLHSVLGNK-WSTIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWANY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS TIAARLPGRT DNEIKNYWNT HIRKRLLKSG 120 IDPVTHTPRL ALLDLSSILR SSICNSPQLM NISGLLGLQS LVNPDLMRLL NTLVTSQRER 180 QDYSLQNLQD NQVSKPQNQN HQFSSFQPNH QMLSSNHQQT PLLTASSTAA FAQFLNEAQQ 240 VLQGNEQSNS INLDSQNSQH TMRQNHNVGF TSISTENVVH FQSNQDYGSD QLFINSLPGN 300 SNFQLNNYFN QDSFGLNSVL STPTSSQTPM NSSNTTEDER DSYCSDLLQF QIPDMLDING 360 FM

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWANY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS TIAARLPGRT DNEIKNYWNT HIRKRLLKSG  120
IDPVTHTPRL ALLDLSSILR SSICNSPQLM NISGLLGLQS LVNPDLMRLL NTLVTSQRER  180
QDYSLQNLQD NQVSKPQNQN HQFSSFQPNH QMLSSNHQQT PLLTASSTAA FAQFLNEAQQ  240
VLQGNEQSNS INLDSQNSQH TMRQNHNVGF TSISTENVVH FQSNQDYGSD QLFINSLPGN  300
SNFQLNNYFN QDSFGLNSVL STPTSSQTPM NSSNTTEDER DSYCSDLLQF QIPDMLDING  360
FM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-101	MYB family protein