PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435675.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 475aa MW: 52985.3 Da PI: 8.3169

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.6	2.3e-18	226	326	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvlt sd+++ grlvlpk +ae++ + ++e++ l+++d +g+ W +++++ +++s++yvl+ G ++ +Lk+gD+++F++++ e++ XP_026435675.1 226 FDKVLTASDASRIGRLVLPKACAEAYfpRLLQPEGRPLKIQDAKGNDWGFQFRFwpNNNSRMYVLE-GVAPCMQSMQLKAGDTITFSRID-PEGK 318 89************************444556778***********99899999999.*******************987.8999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+v+ +++ XP_026435675.1 319 LMVGSRKA 326 99998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MASKVCMNGF CQATSSVKWR KGWDLRFGGV ATLCDKCGFA YEQLVFCDTF HVKESGWRDC 60 SSCGKRLHCG CTASKSLFEL LDNGGVECLG CMKRLHSSMP SDEKPNGFGK EENYSNGIGN 120 ILQMGKNTEG NEHINLLQYL KNDTNGSLCQ MKIEQGMRSV KEVDCKKPPV VARPEAANSM 180 LSQLRIGRLP EGRGRSQMLP RYWPKITEEE LQQISENSNS KIVPLFDKVL TASDASRIGR 240 LVLPKACAEA YFPRLLQPEG RPLKIQDAKG NDWGFQFRFW PNNNSRMYVL EGVAPCMQSM 300 QLKAGDTITF SRIDPEGKLM VGSRKASSSG PQHITQSDSY TTIRSQDCGN SYNGVPEDLN 360 PKKLENLLSL NMDFKKRRSA GGEKANKKHD PDFSLDNIKR RRIVESEKTD EDYEPFSGLE 420 TLAATAVLEE NLGELDSPFL TTANEHPPHH PGCRCTICIK PPSRRGPKQK PADIV

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MASKVCMNGF CQATSSVKWR KGWDLRFGGV ATLCDKCGFA YEQLVFCDTF HVKESGWRDC  60
SSCGKRLHCG CTASKSLFEL LDNGGVECLG CMKRLHSSMP SDEKPNGFGK EENYSNGIGN  120
ILQMGKNTEG NEHINLLQYL KNDTNGSLCQ MKIEQGMRSV KEVDCKKPPV VARPEAANSM  180
LSQLRIGRLP EGRGRSQMLP RYWPKITEEE LQQISENSNS KIVPLFDKVL TASDASRIGR  240
LVLPKACAEA YFPRLLQPEG RPLKIQDAKG NDWGFQFRFW PNNNSRMYVL EGVAPCMQSM  300
QLKAGDTITF SRIDPEGKLM VGSRKASSSG PQHITQSDSY TTIRSQDCGN SYNGVPEDLN  360
PKKLENLLSL NMDFKKRRSA GGEKANKKHD PDFSLDNIKR RRIVESEKTD EDYEPFSGLE  420
TLAATAVLEE NLGELDSPFL TTANEHPPHH PGCRCTICIK PPSRRGPKQK PADIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	399	403	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	3e-73	B3 family protein