PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435673.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 341aa MW: 38574.6 Da PI: 6.2726

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.7e-13	165	210	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++ErrRR+++ ++f L l+P++ +Kl+Ka++L A++Y+k+L+ XP_026435673.1 165 HIMAERRRREKLSQRFIALSALVPNL-----TKLDKASVLGDAIKYLKQLE 210 899********************9.....9***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEDPDFMNQF FDEYKDQNVE SVLDGNFYSL SSDSCNSSII DLENNINSYF DGKTGIHQPV 60 KSLKTESSNS STTTENLWTT TPDASPAGSP PPSSRIISFG CSGNPSVLDL YGGTNNIPVD 120 GIMKSKDEYL LPRNMKRQQN YVKKAGKGTK RPNPDTDTNS PSYDHIMAER RRREKLSQRF 180 IALSALVPNL TKLDKASVLG DAIKYLKQLE EKVKILEEQT TKKTVESVVF VNKRSRVTAD 240 DDIISSYFDD QYVNSLPEVE VKVSNKNVLI RIHCEKHKGS LVKILAEIEK YHLTVVNSNV 300 MVFGDSALDI TIHAKLDEKF CMEIKDFVRN LRSEFLRFMQ D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	174	ERRRRE
2	170	175	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-57	bHLH family protein