PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435653.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TALE

Protein Properties

Length: 351aa MW: 38943.4 Da PI: 5.516

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.5e-09	278	310	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +LA+ +gL+++q+ +WF N+R ++ XP_026435653.1 278 PYPTEEEKMKLADVTGLDQKQINNWFINQRKRH 310 8*****************************885 PP
2	ELK	38.6	2.2e-13	230	251	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++L+rKYsgyL+sL++EF+ XP_026435653.1 230 ELKEMLMRKYSGYLSSLRKEFL 251 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MENMYSLDPA TTSTGFHHQG PQLVLEKLLH GQFEATEGDN IHETHNSTMD HHHHHNHQQM 60 SDVIKAQIAS HPLYPDLVSA YIQCRQVGAP PEMALLLEEI GRDQTTNNPL LCGGGVCSSS 120 HEIGTDPELD EFMESYCKVL LRYKEELSKP FDEATTFLNN IEIQLSNLLL SKGISSTPTN 180 TATTTTSGTG SGSYHSPDGA AGSSEEELSC GEAEASDSHE SSAPRAADQE LKEMLMRKYS 240 GYLSSLRKEF LKKRKKGKLP KDARTTLMDW WNTHCRWPYP TEEEKMKLAD VTGLDQKQIN 300 NWFINQRKRH WKPSEDMRFA LMEGVGGGGG GGAPVYFESS GKGPADINDL C

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MENMYSLDPA TTSTGFHHQG PQLVLEKLLH GQFEATEGDN IHETHNSTMD HHHHHNHQQM  60
SDVIKAQIAS HPLYPDLVSA YIQCRQVGAP PEMALLLEEI GRDQTTNNPL LCGGGVCSSS  120
HEIGTDPELD EFMESYCKVL LRYKEELSKP FDEATTFLNN IEIQLSNLLL SKGISSTPTN  180
TATTTTSGTG SGSYHSPDGA AGSSEEELSC GEAEASDSHE SSAPRAADQE LKEMLMRKYS  240
GYLSSLRKEF LKKRKKGKLP KDARTTLMDW WNTHCRWPYP TEEEKMKLAD VTGLDQKQIN  300
NWFINQRKRH WKPSEDMRFA LMEGVGGGGG GGAPVYFESS GKGPADINDL C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	246	255	LRKEFLKKRK
2	252	256	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-73	TALE family protein