PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026435490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARF | ||||||||
Protein Properties | Length: 682aa MW: 75841.1 Da PI: 5.9762 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 70.8 | 1.7e-22 | 129 | 229 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ +++ ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + + XP_026435490.1 129 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGE 219 99****************************964333..4459************************************************..449 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_026435490.1 220 TGELRVGVRR 229 999*****97 PP | |||||||
2 | Auxin_resp | 108.8 | 5.8e-36 | 255 | 337 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv + + W++S+WrsLk XP_026435490.1 255 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAREQKLSVGMRFKMRFEGEEAPERRFSGTIVGVGENASQWWTDSEWRSLK 337 789******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 682 aa Download sequence |
MALAPANHSS SVDGRNQGSL SDDLYRELWH ACAGPLVTVP REGERVYYFP QGHMEQLEAS 60 TLQPLDKQMP SFNLPSKILC KVVHVQLRAE SETDEVYAQI TLLPESDQGE VTSPDPPLAE 120 PSRCVVHSFC KTLTASDTST HGGFSVLRRH ADDCLPPLDM SQQPPWQELV ATDLHGNEWH 180 FRHIFRGQPR RHLLTTGWSV FVSSKRLVAG DAFIFLRGET GELRVGVRRL MRQLSNMPSS 240 VISSHSMHLG VLATASHAIA TGTLFSVFYK PRTSRSEFIV SVNKYLEARE QKLSVGMRFK 300 MRFEGEEAPE RRFSGTIVGV GENASQWWTD SEWRSLKVQW DEPSSIPRPD RVSPWELEPL 360 VAAAPPTSQP AQRNKRARSP GLPSPTPDVS VFGMWKSPVE SPSSFSHSEL QRGREMYQSP 420 NSNSPFSPLV KPNSRGFSGN SQLALSSSSM YWSNQTETLT DSFISVPSKE SVEKRQETSN 480 GYRLFGIQLV DNTNMEESSP VVASLPGLGE DQPSLDAESD RQSQPSNANR CDVPALSSDP 540 EKSCLRSPQE MQSRQTRSCT KVHMQGIAVG RAVDLTRLDC YDDLLKKLEG MFSIEGELSG 600 PSKKWQVVYT DDEDDMMMVG DDPWHEFCGM ARKIFIYTVE EVKRLSPKAK LPPVNSDVKS 660 TKTDSDVAVA TTEDQSSVAG QA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 0.0 | ARF family protein |