PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026435474.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 336aa    MW: 37842 Da    PI: 5.7943
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026435474.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.9e-11172215654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +i+  ++eY+k+L
  XP_026435474.1 172 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSIVGDTIEYMKEL 215
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MELNEHGFLE EFLELRRETL QTFPAGINDS HQFTHDGSAS FSYFSEYPSS AIQPISSIKG  60
FPMPTEEPGF SYGFNGGYYP FEEELSTQST VVDTSYVKHG ALPFLSTEDN GLVTGNVESE  120
LFPDDLRNIL GEKQSKVELF PPTEIPTKLN RNLCKERKSR VKKIEGQPSK NLMAERRRRK  180
RLNDRLSMLR SVVPKISKMD RTSIVGDTIE YMKELLEKIK NLQNETQVGS DQLSRMGIFK  240
DLKQNEMINS PKFDVERRRN DTRVEVCCAG KPGLLLSTVT AIETLGLEIQ QCVISSFNDF  300
SMQASCSEVL EHGPMLSAGE IKQILIRNAG YGGKCG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175182ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.15e-73bHLH family protein