PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435382.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 348aa MW: 40030.6 Da PI: 4.8196

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.2	2.2e-19	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+llv++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_026435382.1 40 RGPWTVEEDLLLVNYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 87 89********************************************97 PP
2	Myb_DNA-binding	51.1	3.1e-16	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_026435382.1 93 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 136 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MDQDFKGIAM STITHDYNYN NQSDDSSIDQ DDQLMDDLRR GPWTVEEDLL LVNYIANHGE 60 GRWNSLARCA GLKRTGKSCR LRWLNYLRPD VRRGNITLEE QLLILELHSR WGNRWSKIAQ 120 HLPGRTDNEI KNYWRTRVQK HAKQLQCDVN SKQFKDTMRY LWMPRLVERI QAEAASTATT 180 ASSNGAKVAT ANSTNYMNQP NTTMNNGYNQ EFSDDQYMFQ TSNNEFSGSF NNQSFVSATP 240 ENSSTGGSSD SMGSNTQLSS DCYSFPHSNT YNIIQNAHAN NYSETLFSPN SNYYYLQQPQ 300 QQGLEFQGID QQQNNNNNMW LGGGEDVLDN IWNSDDMWFI QQQLSNDL

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MDQDFKGIAM STITHDYNYN NQSDDSSIDQ DDQLMDDLRR GPWTVEEDLL LVNYIANHGE  60
GRWNSLARCA GLKRTGKSCR LRWLNYLRPD VRRGNITLEE QLLILELHSR WGNRWSKIAQ  120
HLPGRTDNEI KNYWRTRVQK HAKQLQCDVN SKQFKDTMRY LWMPRLVERI QAEAASTATT  180
ASSNGAKVAT ANSTNYMNQP NTTMNNGYNQ EFSDDQYMFQ TSNNEFSGSF NNQSFVSATP  240
ENSSTGGSSD SMGSNTQLSS DCYSFPHSNT YNIIQNAHAN NYSETLFSPN SNYYYLQQPQ  300
QQGLEFQGID QQQNNNNNMW LGGGEDVLDN IWNSDDMWFI QQQLSNDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-83	MYB family protein