PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435321.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 666aa MW: 75449.4 Da PI: 6.5125

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.7	1.6e-07	143	206	26	88
FAR1 26 geitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 g+ fvC ++g + ++ + ++++r++r++++++C k++ + ++kw++ l HnHe XP_026435321.1 143 GKGSFVLFVCDRSGVYRYTSCTpDTRKRQRRESKKCDCPFKVRDTCLPENKWRLRVLCGRHNHE 206 5556678******999998867788888888888888888888888*************8 PP
2	FAR1	24.5	9e-08	447	515	21	88
FAR1 21 kskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++k +g+ f C+++g + ++ + + ++r++r+++++gC k++ + ++kw++ l HnHe XP_026435321.1 447 ETKPEGKGSFVLFACNRSGVYRYTSCTpDARKRQRRETKKCGCPFKVRGTCLPENKWRLRVLCGRHNHE 515 334566677889******99999886788889999999999999999*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MEENTPALSV RIDVAQCFQT DAGPVNHPQK QSILMEEDTL ISKAGTDMTQ CFQDDQGKGL 60 KDSNMMEGDA PISKEGVEVI DLCQNDQDEI PVSDPPKDGN MMEADSSVSK KGMDVTQFFQ 120 TDQRLLARTK RVIIGKSETK PAGKGSFVLF VCDRSGVYRY TSCTPDTRKR QRRESKKCDC 180 PFKVRDTCLP ENKWRLRVLC GRHNHEAENT SVPLFNRDEE QLGDKLIESG VRPQQVLEAL 240 KEKNKECLAS TSGSAIYNTR SKLKLKEVAR KSVAQEDAGS VNHPHKDSNV MEENAPASNE 300 RINVARCFQT DAGPVSHLQK ESILIEEDTL ISKVGIDVTQ CFQTYQGEGP VKDPLNGSNM 360 MEEDVPTSKE GMEITQFYQT DQNKIPGSDP PEDGNMMEDD APISREGMDV TQFFQTDQLF 420 DSRDAAFEWC QEVARENNTR IIIRKSETKP EGKGSFVLFA CNRSGVYRYT SCTPDARKRQ 480 RRETKKCGCP FKVRGTCLPE NKWRLRVLCG RHNHEAENIP LPLFNRDVDQ LVVKLTAGGA 540 RPRQVVEALK QKNKDCLVSA KDIYNRRSSL KRHVAEKMSV MEQVMKLSTQ YHYMVWYRKD 600 EETNELKDIV WAHPESTLLA KCFPSMLMID CTYKTNRFKV PFFHVAGISS LGTPFTVAYA 660 FIEEET

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MEENTPALSV RIDVAQCFQT DAGPVNHPQK QSILMEEDTL ISKAGTDMTQ CFQDDQGKGL  60
KDSNMMEGDA PISKEGVEVI DLCQNDQDEI PVSDPPKDGN MMEADSSVSK KGMDVTQFFQ  120
TDQRLLARTK RVIIGKSETK PAGKGSFVLF VCDRSGVYRY TSCTPDTRKR QRRESKKCDC  180
PFKVRDTCLP ENKWRLRVLC GRHNHEAENT SVPLFNRDEE QLGDKLIESG VRPQQVLEAL  240
KEKNKECLAS TSGSAIYNTR SKLKLKEVAR KSVAQEDAGS VNHPHKDSNV MEENAPASNE  300
RINVARCFQT DAGPVSHLQK ESILIEEDTL ISKVGIDVTQ CFQTYQGEGP VKDPLNGSNM  360
MEEDVPTSKE GMEITQFYQT DQNKIPGSDP PEDGNMMEDD APISREGMDV TQFFQTDQLF  420
DSRDAAFEWC QEVARENNTR IIIRKSETKP EGKGSFVLFA CNRSGVYRYT SCTPDARKRQ  480
RRETKKCGCP FKVRGTCLPE NKWRLRVLCG RHNHEAENIP LPLFNRDVDQ LVVKLTAGGA  540
RPRQVVEALK QKNKDCLVSA KDIYNRRSSL KRHVAEKMSV MEQVMKLSTQ YHYMVWYRKD  600
EETNELKDIV WAHPESTLLA KCFPSMLMID CTYKTNRFKV PFFHVAGISS LGTPFTVAYA  660
FIEEET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-11	FAR1 family protein