PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026435318.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 672aa MW: 76070.1 Da PI: 6.6852

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026435318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.7	1.6e-07	149	212	26	88
FAR1 26 geitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 g+ fvC ++g + ++ + ++++r++r++++++C k++ + ++kw++ l HnHe XP_026435318.1 149 GKGSFVLFVCDRSGVYRYTSCTpDTRKRQRRESKKCDCPFKVRDTCLPENKWRLRVLCGRHNHE 212 5556678******999998867788888888888888888888888*************8 PP
2	FAR1	24.5	9.1e-08	453	521	21	88
FAR1 21 kskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++k +g+ f C+++g + ++ + + ++r++r+++++gC k++ + ++kw++ l HnHe XP_026435318.1 453 ETKPEGKGSFVLFACNRSGVYRYTSCTpDARKRQRRETKKCGCPFKVRGTCLPENKWRLRVLCGRHNHE 521 334566677889******99999886788889999999999999999*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MEENTPALSV RIDVAQCFQT DAGPVNHPQK QSILMEEDTL ISKAGTDMTQ CFQDDQGKGL 60 KDSNMMEGDA PISKEGVEVI DLCQNDQDEI PVSDPPKDGN MMEADSSVSK KGMDVTQFFQ 120 TDQHLNGAKR LLARTKRVII GKSETKPAGK GSFVLFVCDR SGVYRYTSCT PDTRKRQRRE 180 SKKCDCPFKV RDTCLPENKW RLRVLCGRHN HEAENTSVPL FNRDEEQLGD KLIESGVRPQ 240 QVLEALKEKN KECLASTSGS AIYNTRSKLK LKEVARKSVA QEDAGSVNHP HKDSNVMEEN 300 APASNERINV ARCFQTDAGP VSHLQKESIL IEEDTLISKV GIDVTQCFQT YQGEGPVKDP 360 LNGSNMMEED VPTSKEGMEI TQFYQTDQNK IPGSDPPEDG NMMEDDAPIS REGMDVTQFF 420 QTDQLFDSRD AAFEWCQEVA RENNTRIIIR KSETKPEGKG SFVLFACNRS GVYRYTSCTP 480 DARKRQRRET KKCGCPFKVR GTCLPENKWR LRVLCGRHNH EAENIPLPLF NRDVDQLVVK 540 LTAGGARPRQ VVEALKQKNK DCLVSAKDIY NRRSSLKRHV AEKMSVMEQV MKLSTQYHYM 600 VWYRKDEETN ELKDIVWAHP ESTLLAKCFP SMLMIDCTYK TNRFKVPFFH VAGISSLGTP 660 FTVAYAFIEE ET

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MEENTPALSV RIDVAQCFQT DAGPVNHPQK QSILMEEDTL ISKAGTDMTQ CFQDDQGKGL  60
KDSNMMEGDA PISKEGVEVI DLCQNDQDEI PVSDPPKDGN MMEADSSVSK KGMDVTQFFQ  120
TDQHLNGAKR LLARTKRVII GKSETKPAGK GSFVLFVCDR SGVYRYTSCT PDTRKRQRRE  180
SKKCDCPFKV RDTCLPENKW RLRVLCGRHN HEAENTSVPL FNRDEEQLGD KLIESGVRPQ  240
QVLEALKEKN KECLASTSGS AIYNTRSKLK LKEVARKSVA QEDAGSVNHP HKDSNVMEEN  300
APASNERINV ARCFQTDAGP VSHLQKESIL IEEDTLISKV GIDVTQCFQT YQGEGPVKDP  360
LNGSNMMEED VPTSKEGMEI TQFYQTDQNK IPGSDPPEDG NMMEDDAPIS REGMDVTQFF  420
QTDQLFDSRD AAFEWCQEVA RENNTRIIIR KSETKPEGKG SFVLFACNRS GVYRYTSCTP  480
DARKRQRRET KKCGCPFKVR GTCLPENKWR LRVLCGRHNH EAENIPLPLF NRDVDQLVVK  540
LTAGGARPRQ VVEALKQKNK DCLVSAKDIY NRRSSLKRHV AEKMSVMEQV MKLSTQYHYM  600
VWYRKDEETN ELKDIVWAHP ESTLLAKCFP SMLMIDCTYK TNRFKVPFFH VAGISSLGTP  660
FTVAYAFIEE ET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-11	FAR1 family protein