PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026435065.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 153aa    MW: 17106.5 Da    PI: 8.9884
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026435065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.84.3e-095779527
                    --SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                     C++f rtG+C+yGd+Ck+ H++
  XP_026435065.1 57 VCNRFIRTGFCQYGDSCKYFHPK 79
                    6********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MPLPKYYCDY CDKQFQYTTF ARKRHCEGLQ HQRAKAFYYD SLKDPNRIQG EGFGKGVCNR  60
FIRTGFCQYG DSCKYFHPKP NLQNPSIPGV MVTNFAEAVQ PPIAAGNQIA GRGGTVPWNL  120
IRDGMGVSLG NLPPSLRPPP EGGYPTLPFV DWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.14e-41C3H family protein