PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434978.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 913aa MW: 102531 Da PI: 6.6703

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	158.5	1.3e-49	30	146	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+e ++rwl+++ei+a+L n + ++++ ++ + pksg+++L++rk++r+fr+DG++wkkkkdgktv+E+he+LKvg+ e +++yYah+ + ptf XP_026434978.1 30 LEEaSSRWLRPNEIHAVLYNSSLFTIHVKPMNLPKSGTVVLFDRKMLRNFRRDGHNWKKKKDGKTVKEAHEHLKVGTEERIHVYYAHGLDSPTFV 124 455599*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL++++e+ivlvhy+e+ XP_026434978.1 125 RRCYWLLDKKYENIVLVHYRET 146 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 913 aa Download sequence
MANSGDGVRL AGAEIHGFHT WQDLDYETML EEASSRWLRP NEIHAVLYNS SLFTIHVKPM 60 NLPKSGTVVL FDRKMLRNFR RDGHNWKKKK DGKTVKEAHE HLKVGTEERI HVYYAHGLDS 120 PTFVRRCYWL LDKKYENIVL VHYRETSETL SSPATPVTST SGSTYSDSAV SKVLLEETDT 180 GANNAGSYFV NKPIQLDDNV TENYNVKTLH EINTLDWDDL LVTNEPIGST HETDNFSCLE 240 EWNQNESKYN SGLLPSDNVN KHDSSFHGST NTTSVHPSID GTLPTGGHFQ TVVTQANSNV 300 GKEGFEPMVE GADGLLAQDS FGRWMNYVMT ESPGSLDNPS GGSSISNGYG SNINGEVDHH 360 HSSMHKQVFT ITEISPTWAF SSEETKVIVI GYFNGGPSHL ADSDLLMILG DECVPAEMIQ 420 HGVYRCKALP HSPGLVNLHL SMDGQTPISQ VMSFEYRSPS VVNEVASPND EPSRDEFQIQ 480 IRLAHLLFSS SNSLSILSNK ASPTVLKEAK KFAHSTSSII KDWDYLIKSA MNNDISFQQA 540 QKSLFEITLK NKLHEWLLER VIEGSKISAR DHQGLGIIHL CAILGYTWAV RPFSRSGLSL 600 DFRDSRGWTA LHYAAHFGRE EMVAVLLSSG ANPSLVTDPT SEFPGGCTSA DLAAQNGYEG 660 LAAYLAEKGL TEHFKRMSLS GNISGSLQTS STDIVDPSGL NEEELCQKDT LTAYRTAADA 720 AARIQAAFRE NTLKLKTEAV NQANPELEAR NIISAMRIQR AFRNYESRRQ MAAAARIQYT 780 YRTWKIRKEF LYLRRQTIKI QAAFRGLQAR KNYRKICWSV GVLEKAIMRW RKKRKGLRGL 840 QVEPTMVDAV DPNDENVVED FFIISRKQAE DRVERSVVRV QALFRSYRAQ QQYRRMKLAC 900 DQAELDELFE PDL

Sequence ? help Back to Top

Protein Sequence Length: 913 aa Download sequence

MANSGDGVRL AGAEIHGFHT WQDLDYETML EEASSRWLRP NEIHAVLYNS SLFTIHVKPM  60
NLPKSGTVVL FDRKMLRNFR RDGHNWKKKK DGKTVKEAHE HLKVGTEERI HVYYAHGLDS  120
PTFVRRCYWL LDKKYENIVL VHYRETSETL SSPATPVTST SGSTYSDSAV SKVLLEETDT  180
GANNAGSYFV NKPIQLDDNV TENYNVKTLH EINTLDWDDL LVTNEPIGST HETDNFSCLE  240
EWNQNESKYN SGLLPSDNVN KHDSSFHGST NTTSVHPSID GTLPTGGHFQ TVVTQANSNV  300
GKEGFEPMVE GADGLLAQDS FGRWMNYVMT ESPGSLDNPS GGSSISNGYG SNINGEVDHH  360
HSSMHKQVFT ITEISPTWAF SSEETKVIVI GYFNGGPSHL ADSDLLMILG DECVPAEMIQ  420
HGVYRCKALP HSPGLVNLHL SMDGQTPISQ VMSFEYRSPS VVNEVASPND EPSRDEFQIQ  480
IRLAHLLFSS SNSLSILSNK ASPTVLKEAK KFAHSTSSII KDWDYLIKSA MNNDISFQQA  540
QKSLFEITLK NKLHEWLLER VIEGSKISAR DHQGLGIIHL CAILGYTWAV RPFSRSGLSL  600
DFRDSRGWTA LHYAAHFGRE EMVAVLLSSG ANPSLVTDPT SEFPGGCTSA DLAAQNGYEG  660
LAAYLAEKGL TEHFKRMSLS GNISGSLQTS STDIVDPSGL NEEELCQKDT LTAYRTAADA  720
AARIQAAFRE NTLKLKTEAV NQANPELEAR NIISAMRIQR AFRNYESRRQ MAAAARIQYT  780
YRTWKIRKEF LYLRRQTIKI QAAFRGLQAR KNYRKICWSV GVLEKAIMRW RKKRKGLRGL  840
QVEPTMVDAV DPNDENVVED FFIISRKQAE DRVERSVVRV QALFRSYRAQ QQYRRMKLAC  900
DQAELDELFE PDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein