PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434937.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 384aa MW: 41629 Da PI: 5.4453

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.4e-13	157	208	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_026434937.1 157 QRMTHIAVERNRRRQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 208 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MALEVFPQEL FGYGFKDLYN LLGGGGGGGN SNFLSYDYGV EEDSKQEVIV SGSGGGGGGG 60 GEIINHHHNK QEAADTNWDI SSSSSLVRNV KELQETNSSS EIVNGDGSFL GFSSQQISED 120 PVSISTAAAA TTDSSASGRR KRRRAKSNKN KEEVENQRMT HIAVERNRRR QMNEYLAVLR 180 SLMPPSYVQR GDQASIIGGA INFVKELEQL LQSLESQKQA FKKSSSASAS PSLEDANNTS 240 NAGVTIPFAD FFTYPQYSSH SSSNQSSNIN SAGMGASNSS DSLSENHPRY GPIADIEVTM 300 VESHANLKIL TKRRPKQLLK MASGFQTLRL SILHLNVTTT VDQLVLYSLS VKVEEDCQLT 360 SVDEIATAVY QMLGTIQDET CRLS

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MALEVFPQEL FGYGFKDLYN LLGGGGGGGN SNFLSYDYGV EEDSKQEVIV SGSGGGGGGG  60
GEIINHHHNK QEAADTNWDI SSSSSLVRNV KELQETNSSS EIVNGDGSFL GFSSQQISED  120
PVSISTAAAA TTDSSASGRR KRRRAKSNKN KEEVENQRMT HIAVERNRRR QMNEYLAVLR  180
SLMPPSYVQR GDQASIIGGA INFVKELEQL LQSLESQKQA FKKSSSASAS PSLEDANNTS  240
NAGVTIPFAD FFTYPQYSSH SSSNQSSNIN SAGMGASNSS DSLSENHPRY GPIADIEVTM  300
VESHANLKIL TKRRPKQLLK MASGFQTLRL SILHLNVTTT VDQLVLYSLS VKVEEDCQLT  360
SVDEIATAVY QMLGTIQDET CRLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	144	RKRRR
2	158	169	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-65	bHLH family protein