PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026434906.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 413aa    MW: 46455 Da    PI: 7.8838
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026434906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3802.4e-25147248199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+ltpsd++++g +++ +++a+e+      ++++++ ++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD+++F   + ++
  XP_026434906.1 147 FCKILTPSDTSTHGGFSVLRRHANEClppldmSQQPPC-QELVAKDLHGVEWRFRHIYRGQPKRHLLTSGWSTFVNSKKLVAGDTFIFI--RAED 238
                     99*****************************7555556.5*************************************************..4599 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+++r+
  XP_026434906.1 239 GELRVGFRRA 248
                     *******997 PP
2Auxin_resp101.79.2e-34274355182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     a+ha+st+s+F+v+Y+Pr+s+seF +++++++++++++++vG+Rfkm+++ e+++e r sGt vg+++ dpv+Wp S+W++L
  XP_026434906.1 274 ASHALSTGSMFSVYYRPRTSPSEFLIPYKQYMNSVRSSFAVGTRFKMRIDREEAPEERPSGTLVGIEEDDPVHWPCSQWKCL 355
                     789******************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MMGCVGAEGL NLEGICPDII KDPTSLEQVL LCKSRDERDG IYGALWNACA GPSVKIPRIG  60
EKVFYFPQGH LEQVEAYTNQ RTSSQMPVYD LPSKILCRVI YVQLKAEMES DEVFAQVTLV  120
PDSKQDEPGI NKEKLLFPPK NTKVYSFCKI LTPSDTSTHG GFSVLRRHAN ECLPPLDMSQ  180
QPPCQELVAK DLHGVEWRFR HIYRGQPKRH LLTSGWSTFV NSKKLVAGDT FIFIRAEDGE  240
LRVGFRRASS KMQSYPSTSV ISSHTMQLGI LATASHALST GSMFSVYYRP RTSPSEFLIP  300
YKQYMNSVRS SFAVGTRFKM RIDREEAPEE RPSGTLVGIE EDDPVHWPCS QWKCLVAHWD  360
EPSSSVPRPL RISPWMIEPL SAATNMQQVQ SRTKRLRTSQ ASPDESSTLC NDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-174ARF family protein