PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026434793.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 250aa MW: 27910 Da PI: 6.744 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 54.4 | 4.1e-17 | 53 | 139 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++++k GF v+ks+s k+ +g i +++f+C + gk ++ ++k r++a+ ++gC+akl+++++ ++++ l+leHnHel p XP_026434793.1 53 EFYKTFGKVKGFPVVKSTSVKN-GEGCIRSYKFTCARAGKCNSISEK---PLRPQATIKCGCQAKLVLRLDCLVGYVISLLNLEHNHELKP 139 6*****************9999.7888*************9998766...999***********************************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 250 aa Download sequence |
MHIEEVGESS NVESTLMQEE TFEKSECTDI SGIKPNIEPV IGMGFESIDD AWEFYKTFGK 60 VKGFPVVKST SVKNGEGCIR SYKFTCARAG KCNSISEKPL RPQATIKCGC QAKLVLRLDC 120 LVGYVISLLN LEHNHELKPE FARHFCCNRF INSGVKNQID LLDQSGIRLC KSYDICVNEA 180 GGHENMTCSQ KDCRNLIDKL RSARLGEGDA VVILKYFIKM GSQGLGFYLS VDIDDTGHLT 240 ILFWADGRSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G15090.1 | 9e-28 | FAR1 family protein |