PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026434512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 348aa MW: 39559.2 Da PI: 6.0018 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.9 | 5.6e-28 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l +s XP_026434512.1 9 KRIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58 79********************************************9997 PP | |||||||
2 | K-box | 25 | 7.7e-10 | 110 | 179 | 9 | 76 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGe..dLesLslkeLqqLeqqLekslkkiRskKnellleq 76 + +++ e lqqe++ +++i++++ e+R++ + +++s+++ e + e++L+k l i ++K+ l ++q XP_026434512.1 110 AVNSNIEDLQQEISSFQQQIQMIEAELRNFDPDpvNMSSMTMGEVDSCERNLQKTLDCITKRKEYLAHNQ 179 567899************************998335789************************9998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MGRVKLQIKR IENNTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLSHFSGK 60 RRIEDVLTRY INLPEHDRGG AIQNRESLIL TLKNLKGQSD MALQLANPAA VNSNIEDLQQ 120 EISSFQQQIQ MIEAELRNFD PDPVNMSSMT MGEVDSCERN LQKTLDCITK RKEYLAHNQQ 180 LNSYDPSSSI QMQMFLNSQE GIPTSFGNDV ANWMPENQHN HPIQINFGSD PLMSLRDHSS 240 SVYDHQLQHG STSLHVDPRN MGECHVSNPS DGDLQTWNQT FPSTDFLSAL MPSTSFPHEM 300 VGSNMQQGMS QMLSREQLES QQNCSHMHQP QPPQTNNHCV DYENIGQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77980.1 | 1e-77 | MIKC_MADS family protein |