PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434018.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 503aa MW: 55849.3 Da PI: 6.8763

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.4	6.9e-13	23	67	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l + + G+++W+ Ia+++ +t qc+ rw++yl XP_026434018.1 23 TWTQQEDDILREQISINGTENWAIIANKFK-DKTTRQCRRRWYTYL 67 6**************************9.***********97 PP
2	Myb_DNA-binding	41.2	3.7e-13	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd l +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_026434018.1 73 KGGWSPEEDMVLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 116 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MKHQETRNLK SKSAKQKERH IVTWTQQEDD ILREQISING TENWAIIANK FKDKTTRQCR 60 RRWYTYLNSD FKKGGWSPEE DMVLCEAQKI FGNRWTEIAK VVSGRTDNAV KNRFTTLCKK 120 RAKHETILKE NKSLCTNPNN KRVLFQNGLV TEGTSESIAP LKKMRTNISD VTENCDHEGR 180 LLRLCGTTEA QQLRPPFAVI FPKSHGVDDL PTQQHVSNTI SVTSTDVGKS NDQATFLKRN 240 DPRITVLMQQ AELLSSLAAK VNSEGNNQSL DNAWKELQDF LNRNHKSNQL QSELPDTDFH 300 LEGLKELIED LRSNTFGGHL HWRQQDLHEE SSGSSGNSTE STLQSHSAGE KTELPQGEVC 360 SLYQATGVEP QSITLLESDG TGGEDGFLCS RVANVGAGNN ADAGGLEEFH TGTIVTQVEL 420 LASSTEPKGT DQLVPAMSNA EFSSPVKVTP LFRSFGAAIP TPLFSESERN FLLKTFGSAS 480 SPPNPSSNHS QPPPCKRSLL QSL

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MKHQETRNLK SKSAKQKERH IVTWTQQEDD ILREQISING TENWAIIANK FKDKTTRQCR  60
RRWYTYLNSD FKKGGWSPEE DMVLCEAQKI FGNRWTEIAK VVSGRTDNAV KNRFTTLCKK  120
RAKHETILKE NKSLCTNPNN KRVLFQNGLV TEGTSESIAP LKKMRTNISD VTENCDHEGR  180
LLRLCGTTEA QQLRPPFAVI FPKSHGVDDL PTQQHVSNTI SVTSTDVGKS NDQATFLKRN  240
DPRITVLMQQ AELLSSLAAK VNSEGNNQSL DNAWKELQDF LNRNHKSNQL QSELPDTDFH  300
LEGLKELIED LRSNTFGGHL HWRQQDLHEE SSGSSGNSTE STLQSHSAGE KTELPQGEVC  360
SLYQATGVEP QSITLLESDG TGGEDGFLCS RVANVGAGNN ADAGGLEEFH TGTIVTQVEL  420
LASSTEPKGT DQLVPAMSNA EFSSPVKVTP LFRSFGAAIP TPLFSESERN FLLKTFGSAS  480
SPPNPSSNHS QPPPCKRSLL QSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-148	MYB family protein