PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433901.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 634aa MW: 72956.7 Da PI: 8.251

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26	2.9e-08	85	164	16	90
FAR1 16 kskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +s+sk++ +g+ + t+ C ++g +++kkk e ++r++ + ++gC +lk + +kw + + HnHel+ XP_026433901.1 85 ISHSKRT-LKGKGSRITLGCERSGWYTDHKKKslkpkpPEPRKRKSRTRKCGCPFQLKCDWVEGNKWTLRVVCGRHNHELS 164 4444444.67778999******99999999899998888889999999******999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MVDGTINSSP RMEITPSVGS PQLDVDPGVD SPQLVEMTSI TEPDSQSIAV DLTPFFVTNQ 60 VFDSREAIIE WCQEVGKKNN TVLVISHSKR TLKGKGSRIT LGCERSGWYT DHKKKSLKPK 120 PPEPRKRKSR TRKCGCPFQL KCDWVEGNKW TLRVVCGRHN HELSDTLTGH AYAGRLKEEE 180 KQLVLHLTAT GVPPQQVLIA LKEKSKENYS TLKTIYNVKA KHRKSQVEGK SAMQQVMELL 240 AQYHYVEKHR SNEETNEVRD IFWVHPESML LAKCFPSVLM IDSTCKTNRF KKPLIHIVGI 300 SSTGKLFTVA FAFMEAGTEQ HYIWALTQLK WMYMPNTLPS LFVTDRESAL VNAIDIVFPR 360 SSRLLSTWHL NQQVQANCEK AFEDIEEWEQ FLTDWNHVWQ AETMDECGDA YADFATKWAP 420 KYPSCIIYLR DTWLIQKEKF ALAWTNKIKH FGNTTTKADK EHENLRKYLV SAVDSYNTCW 480 KAMHNMIKDE IAQIKFSFEL SLTTLNQEHL SPALEELRNH VSHKALELVL FEIHCSENLG 540 NEESSCRCFL HSIHGLPCAH ELVKYVPQGK AIPLSNIDSH WKQLSIVPTQ ELYNGFDVLP 600 EFQLLKQKWI QAVEPRRSLL LRKIKDIATF KTRN

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MVDGTINSSP RMEITPSVGS PQLDVDPGVD SPQLVEMTSI TEPDSQSIAV DLTPFFVTNQ  60
VFDSREAIIE WCQEVGKKNN TVLVISHSKR TLKGKGSRIT LGCERSGWYT DHKKKSLKPK  120
PPEPRKRKSR TRKCGCPFQL KCDWVEGNKW TLRVVCGRHN HELSDTLTGH AYAGRLKEEE  180
KQLVLHLTAT GVPPQQVLIA LKEKSKENYS TLKTIYNVKA KHRKSQVEGK SAMQQVMELL  240
AQYHYVEKHR SNEETNEVRD IFWVHPESML LAKCFPSVLM IDSTCKTNRF KKPLIHIVGI  300
SSTGKLFTVA FAFMEAGTEQ HYIWALTQLK WMYMPNTLPS LFVTDRESAL VNAIDIVFPR  360
SSRLLSTWHL NQQVQANCEK AFEDIEEWEQ FLTDWNHVWQ AETMDECGDA YADFATKWAP  420
KYPSCIIYLR DTWLIQKEKF ALAWTNKIKH FGNTTTKADK EHENLRKYLV SAVDSYNTCW  480
KAMHNMIKDE IAQIKFSFEL SLTTLNQEHL SPALEELRNH VSHKALELVL FEIHCSENLG  540
NEESSCRCFL HSIHGLPCAH ELVKYVPQGK AIPLSNIDSH WKQLSIVPTQ ELYNGFDVLP  600
EFQLLKQKWI QAVEPRRSLL LRKIKDIATF KTRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	128	KKKSLKPKPPEPRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-16	FAR1 family protein