PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026433739.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 422aa MW: 46667.2 Da PI: 6.7808

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026433739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.5	2.8e-14	215	261	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L XP_026433739.1 215 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 261 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MCGKKEEDES GECSHQSSIH EQHGYHQQQL FLQQQQQQQL HQQQFTCSND AYDGGGGRGG 60 GGQVFPSDMI SPILPWSLPP VHAAFNPVQF STVQNHHPAD HPLNLVSHTN PPPPLPTSSA 120 SSYGALFNNR RASSYNHLHF APSYDHHPSS SSSDQHHHHL RIISDQLIGS FHHHHNQPTS 180 SSHHLHPFGN SSIQAELGKM TAQEILDAKA LAASKSHSEA ERRRRERINN HLAKLRSLLP 240 STTKTDKASL LAEVIQHVKE LKRQTSQIAE ASPVPTENDE LTVDNASDED GRFIIKASLC 300 CEDRSDLLPD LIKTLKALRL RTLKAEITTL GGRVKNVLFI TGDDDHDHNE DDDSHDHHHQ 360 QQQHSLSSIQ EALKAVMERS TTTNATLPGG GGDDSSSGTI KRQRTTTGST TSNMNMLENR 420 SL

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MCGKKEEDES GECSHQSSIH EQHGYHQQQL FLQQQQQQQL HQQQFTCSND AYDGGGGRGG  60
GGQVFPSDMI SPILPWSLPP VHAAFNPVQF STVQNHHPAD HPLNLVSHTN PPPPLPTSSA  120
SSYGALFNNR RASSYNHLHF APSYDHHPSS SSSDQHHHHL RIISDQLIGS FHHHHNQPTS  180
SSHHLHPFGN SSIQAELGKM TAQEILDAKA LAASKSHSEA ERRRRERINN HLAKLRSLLP  240
STTKTDKASL LAEVIQHVKE LKRQTSQIAE ASPVPTENDE LTVDNASDED GRFIIKASLC  300
CEDRSDLLPD LIKTLKALRL RTLKAEITTL GGRVKNVLFI TGDDDHDHNE DDDSHDHHHQ  360
QQQHSLSSIQ EALKAVMERS TTTNATLPGG GGDDSSSGTI KRQRTTTGST TSNMNMLENR  420
SL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	54	62	GGGGRGGGG
2	55	63	GGGGRGGGG
3	56	64	GGGGRGGGG
4	221	226	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	5e-66	bHLH family protein