PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026432930.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 792aa MW: 88533.5 Da PI: 5.4887

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026432930.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.3	8.9e-11	470	513	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++ +++ +Lr l+P+ + K++ a+iL A+eY+++Lq XP_026432930.1 470 VAERKRRKKLSDRLYKLRALVPNiS------KMDRAAILGDAIEYVQELQ 513 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MLVMEIVNNE QVVHSLMEKL RPLVGLQGGG GGCWDYCVMW KLMWAEDHSP PPHLHHHLDQ 60 SCCRFIEWVS CCCGGAGADV DRNISITGEA ELLMFPVSDH HDQRHPCRDL MFQHSRTKNY 120 DLLAKLPSTI PLMDSDDHGT GVHAQSLISN QPTWITNVPN CSIQLSQSSF SSEETIGTTV 180 LIPVPGEGGG LIEFFAAKHV AEDPQLIEFV MTHCNLSWEE QQQETAIMLM NTTLATYQHD 240 HYHLLDHQHR QPIADDDGRF QQNVSGGNDN YDNDNGLTNP AAMSNINNFN NSNLPWDLSV 300 DRIRLTSSSS SSPLNFFGCG LSSSGTQHQE QVDGNAVLDS PIMDDKAHHN ISGFADIINV 360 PLLQESLMNT ADATNLHFGS SANNNIEYSM SSRMPTTTPI KGSPSNHLAT VGKAGTDNRD 420 SENKLVGLDT GRADSVLSGC SNDRIIEGED EDDNNTTNRS GRPHQSKNLV AERKRRKKLS 480 DRLYKLRALV PNISKMDRAA ILGDAIEYVQ ELQKQVKDLQ DELEDQPSGD HDQHLQDDYN 540 ERRKNNKQQQ ISSCLQLQFD HHQNGTSGWP TANDQYQHDH QTVAATGSKI GLASNNHQHQ 600 QYLAGPPAAR CSSISNNNNN NNSNIVINCS QQPLNNNQQS SSTPTWDDSH GDDKQQTQQM 660 EPQVEVNQIE RNEFFLKVLC EHKPGGFGRL MEAMNSLGLE VTNANVTTFR SLVLNVFKVE 720 KRDNDEMVQA DHVRDSLLEI TRDRMMGGWP KQIVDDQVGL DINSNYDHDQ HHHHEHGYGC 780 HPISLLHHHH QG

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MLVMEIVNNE QVVHSLMEKL RPLVGLQGGG GGCWDYCVMW KLMWAEDHSP PPHLHHHLDQ  60
SCCRFIEWVS CCCGGAGADV DRNISITGEA ELLMFPVSDH HDQRHPCRDL MFQHSRTKNY  120
DLLAKLPSTI PLMDSDDHGT GVHAQSLISN QPTWITNVPN CSIQLSQSSF SSEETIGTTV  180
LIPVPGEGGG LIEFFAAKHV AEDPQLIEFV MTHCNLSWEE QQQETAIMLM NTTLATYQHD  240
HYHLLDHQHR QPIADDDGRF QQNVSGGNDN YDNDNGLTNP AAMSNINNFN NSNLPWDLSV  300
DRIRLTSSSS SSPLNFFGCG LSSSGTQHQE QVDGNAVLDS PIMDDKAHHN ISGFADIINV  360
PLLQESLMNT ADATNLHFGS SANNNIEYSM SSRMPTTTPI KGSPSNHLAT VGKAGTDNRD  420
SENKLVGLDT GRADSVLSGC SNDRIIEGED EDDNNTTNRS GRPHQSKNLV AERKRRKKLS  480
DRLYKLRALV PNISKMDRAA ILGDAIEYVQ ELQKQVKDLQ DELEDQPSGD HDQHLQDDYN  540
ERRKNNKQQQ ISSCLQLQFD HHQNGTSGWP TANDQYQHDH QTVAATGSKI GLASNNHQHQ  600
QYLAGPPAAR CSSISNNNNN NNSNIVINCS QQPLNNNQQS SSTPTWDDSH GDDKQQTQQM  660
EPQVEVNQIE RNEFFLKVLC EHKPGGFGRL MEAMNSLGLE VTNANVTTFR SLVLNVFKVE  720
KRDNDEMVQA DHVRDSLLEI TRDRMMGGWP KQIVDDQVGL DINSNYDHDQ HHHHEHGYGC  780
HPISLLHHHH QG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	472	479	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	8e-61	bHLH family protein