PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431981.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 635aa MW: 69604.3 Da PI: 8.7531

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.4	6.1e-33	259	316	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers +++++ei+Y+g+Hnh+k XP_026431981.1 259 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-EGQITEIVYKGSHNHPK 316 7**************************************.*************85 PP
2	WRKY	104.8	4.5e-33	456	514	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k++er+++d ++v++tYeg+Hnh+ XP_026431981.1 456 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSNGCPVRKHIERASHDLRAVITTYEGKHNHD 514 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MTSSGGGGRS SGLDTTTTSS IEYPNFSFST SNSNSTNHQF MNSSSFSDLL ATNNYTTDST 60 FSNRGSGGYA DRIGSGGGGG VPKFKSTPPP SLPISPPSLA VSPSSYFSIP PGLSPAELLD 120 SPVLLSSSNI LPSPTTGSFP AHNPSFNWRS NSQQSNNINT IRQETERRKT NNYSIVTSSS 180 SLPSSNDFSF QTQSWNSNSI SSDNHNHRNI VKSEFPPPLL QGFSSLPSDH QFSSSSSTTT 240 QQILPTIHHQ TLREKRRSED GYNWRKYGQK QVKGSENPRS YYKCTFPNCP TKKKVERSLE 300 GQITEIVYKG SHNHPKPTST RRSSSSSLQS STSLPSSHQQ QPPLSSSSSI VVSALAISSD 360 NNHGGNSSSQ MELVTTPENS SNNSIGDEVD FDHSSDHKSK SNGDDFDDHH DQEPEAKRWK 420 RESENEGEGI SAPPAGSRTV REPRVVVQTT SDIDILDDGY RWRKYGQKVV KGNPNPRSYY 480 KCTSNGCPVR KHIERASHDL RAVITTYEGK HNHDVPAARG SGMHRQQQSA AATTTMGSSH 540 NNGSSVVRPY TTSLVNNVNN NNNNHSYRND NQGGQAPFTL EMLQTSPGSF GFSGFSMNTN 600 NSFRNNQQQQ QQQQGFFSKT KDEPRDDMFL ESLLF

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MTSSGGGGRS SGLDTTTTSS IEYPNFSFST SNSNSTNHQF MNSSSFSDLL ATNNYTTDST  60
FSNRGSGGYA DRIGSGGGGG VPKFKSTPPP SLPISPPSLA VSPSSYFSIP PGLSPAELLD  120
SPVLLSSSNI LPSPTTGSFP AHNPSFNWRS NSQQSNNINT IRQETERRKT NNYSIVTSSS  180
SLPSSNDFSF QTQSWNSNSI SSDNHNHRNI VKSEFPPPLL QGFSSLPSDH QFSSSSSTTT  240
QQILPTIHHQ TLREKRRSED GYNWRKYGQK QVKGSENPRS YYKCTFPNCP TKKKVERSLE  300
GQITEIVYKG SHNHPKPTST RRSSSSSLQS STSLPSSHQQ QPPLSSSSSI VVSALAISSD  360
NNHGGNSSSQ MELVTTPENS SNNSIGDEVD FDHSSDHKSK SNGDDFDDHH DQEPEAKRWK  420
RESENEGEGI SAPPAGSRTV REPRVVVQTT SDIDILDDGY RWRKYGQKVV KGNPNPRSYY  480
KCTSNGCPVR KHIERASHDL RAVITTYEGK HNHDVPAARG SGMHRQQQSA AATTTMGSSH  540
NNGSSVVRPY TTSLVNNVNN NNNNHSYRND NQGGQAPFTL EMLQTSPGSF GFSGFSMNTN  600
NSFRNNQQQQ QQQQGFFSKT KDEPRDDMFL ESLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.2	6e-73	WRKY family protein