PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026431399.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 349aa    MW: 38653.9 Da    PI: 7.1018
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026431399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12175221455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++ErrRR+++ ++f  L  ++P +     kK++Ka++L  Av+Y+k+Lq
  XP_026431399.1 175 DHVMAERRRREKLSQKFVALSAVVPGL-----KKMDKASVLGDAVKYMKQLQ 221
                     599************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MENLSIHCLS DMGMEDQVLI NQYSYMDTID ELTVQQIAAA LGGDFNRQSF SSSYPAYMET  60
TGERSAKQLK TSDSWNYTTG HTRQNITSTP PVESSSPSNF PSFGKNTPQV AQICENVGGP  120
VNPKEEVVSP GKNNMMLPSD VSDMNINSTS KGKQQGRKRT TSAAMEDNQE SCTKDHVMAE  180
RRRREKLSQK FVALSAVVPG LKKMDKASVL GDAVKYMKQL QEKVKTLEEL TTKKTVESVI  240
FLKKTQIYAE SSSDENPVAG STCDEPLPEI EARVSHKNVL IRIHCEKRNG VFVKILSQIE  300
KLHLSIISSS AIPFDESSLA ITITAQMNAE YIMTVKDLVK SLRSVVINI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180185ERRRRE
2181186RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.17e-48bHLH family protein