PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026431267.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 318aa MW: 36548.6 Da PI: 9.4056

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026431267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.1	7.4e-24	81	125	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC ++++ ++k+CE+H+hrgr+rsrk++ee XP_026431267.1 81 DPEPGRCRRTDGKKWRCAKEAYHDSKYCEKHMHRGRNRSRKPVEE 125 79****************************************986 PP
2	QLQ	52.5	1.5e-18	11	44	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+ Q+q+L++Q+l++K+++++ P+P+eLl+++ XP_026431267.1 11 PFTPLQWQELETQALIFKHMVSGIPIPAELLFPL 44 9******************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MLMNGGRNKP PFTPLQWQEL ETQALIFKHM VSGIPIPAEL LFPLKFHTSS SSSLLSSKLF 60 LPSDPQIPWT YYHMGLGRKI DPEPGRCRRT DGKKWRCAKE AYHDSKYCEK HMHRGRNRSR 120 KPVEEILTST SNQSKSMISS NFSPYYNSPS SSSSSSSRYG FPYPSTNSTP HFAKDSTESP 180 SYSRSVNGGG RDERSFFTEK PDLSLSNSNS WNYTPLRMNS SSVSPALQNG FSQFDHINHN 240 NIHHQQEQEQ QQQKKHCFVL GTDFFKPAKP EKQQEQDQEQ HHHHQFLHFI DEYPPRNREP 300 TSSTTSTQLS ISIPHPFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-44	GRF family protein