PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026430706.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 539aa    MW: 60599.2 Da    PI: 5.8964
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026430706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS255.52e-781585372374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfs 94 
                     ++lLl c  a+s+g+l+++q+lL  l+elas++gd+++Rla y ++AL ++l++s++++  + +  +++e +  +    ++l  f+evsP+++f+
  XP_026430706.1 158 EQLLLPCGVAISAGNLARVQHLLYVLHELASSSGDANHRLANYGLRALTHHLSSSTTTVGPTSSIFASTEPRLFQ----RSLlkFYEVSPWFTFA 248
                     689***************************************************888888777777776433333....33345*********** PP

            GRAS  95 hltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgv 174
                     + + N+ Il+ ++++     +++Hi+D+++s+G+QWp+Ll+aL+ R+ +++p +RiT+++s++s+                ++ rL++fA+++++
  XP_026430706.1 249 NTISNSSILQVLAQQsksssKTLHILDIGVSHGIQWPTLLEALSRRSnGPTPVVRITVINSSTSDcshtvypfsIGPPGDDYATRLRRFAKSINI 343
                     ***********999888888899************************66678*********99999888888777778899************** PP

            GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerflealeyysa 266
                     ++e++ l ++ l+ l++e+++++p E+l+V+ +++lh+l +++ + e  r+++L+++ +l+P  v+++e+++ +   + ++F  +f++++ey + 
  XP_026430706.1 344 DLEIEQLNTHPLQILTPEMINTSPSETLIVCTQFRLHNLNHNTPNDE--RTKFLQFLTKLKPSAVILSENDVACsctQCGNFSIGFTRKVEYLWR 436
                     *******999*****************************85555444..6*********************6663145569************** PP

            GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvl 360
                     +++s++  +    + r   Er++++ e+++v++ e ++    +   ekW ++++e+GF +  ++e++ +  k+llrk++ +++++v+e++g+++l
  XP_026430706.1 437 FLESTSCAF----KGRDCEERKVFEGEASKVIMSEMEM----NDGREKWCDKMGEVGFVSEGFGEDVIDGGKSLLRKYDsNWEMKVDEKDGCACL 523
                     *****9996....899999****************999....778889*******************************9999************ PP

            GRAS 361 gWkdrpLvsvSaWr 374
                      Wk++++ ++S W+
  XP_026430706.1 524 LWKGERVSFCSLWK 537
                     *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MSMITTMTIR EEHDEPESLY DHSDDHILDW LQDTVPFLPS FFDDPNYTTT TITNPTNIVS  60
DITEEFQWWD DQDLIIDPNL DLINPTPNTP TTPTTTTTTT TANLLPPSLS KKRKPSDVNL  120
QVNNQRRRSV GPTKKSTVKS AGNNYYNCNN SKDGRWAEQL LLPCGVAISA GNLARVQHLL  180
YVLHELASSS GDANHRLANY GLRALTHHLS SSTTTVGPTS SIFASTEPRL FQRSLLKFYE  240
VSPWFTFANT ISNSSILQVL AQQSKSSSKT LHILDIGVSH GIQWPTLLEA LSRRSNGPTP  300
VVRITVINSS TSDCSHTVYP FSIGPPGDDY ATRLRRFAKS INIDLEIEQL NTHPLQILTP  360
EMINTSPSET LIVCTQFRLH NLNHNTPNDE RTKFLQFLTK LKPSAVILSE NDVACSCTQC  420
GNFSIGFTRK VEYLWRFLES TSCAFKGRDC EERKVFEGEA SKVIMSEMEM NDGREKWCDK  480
MGEVGFVSEG FGEDVIDGGK SLLRKYDSNW EMKVDEKDGC ACLLWKGERV SFCSLWKLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-137GRAS family protein