PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430428.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 518aa MW: 56052.2 Da PI: 4.6671

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	312	357	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+P+a + +K+++L + +eY+k Lq XP_026430428.1 312 HSIAERLRREKIADRMKNLQELVPNA-----SRADKSSMLDEIIEYVKFLQ 357 99*********************9.....79***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MDEFLDQIFS SSSWSDVSTV ERSSWGRNGL AQNDGLLTDC LGIFEGGEKN LLVNMPPSSQ 60 CMDKLATSYD FSKDLLTDEP QLLGEVFNRD IQSLYGAELV NAGNMNSSYM SMQSNMCPST 120 LDSLSRSSPE LVPVVSGSDQ SPCALRDSGS VGSNDSEASG IHPSIGESQS FTSIPQLWTR 180 PSYGGVPSLP PVIEQDKLQG FGLQGDFVET DANGFGIGDD KNLSVRNFNS LTSAQEELHG 240 LPSFVPNNQI PVARTHSQMQ LPQLGEGNPT AHYTDQNPVS QLPHSSVTPG GGCNGGIKPR 300 IRARRGQATD PHSIAERLRR EKIADRMKNL QELVPNASRA DKSSMLDEII EYVKFLQLQV 360 KVLSMSRLGA AGAVVPLITD GQPEGSGNLL LTGQEGYQSD SEDNAAFEEE LVKLMESNVT 420 AAMQFLQTKG LCLMPIALAG ALSSKKEASS PDSSEKKKPY FTNGHLPHNH NPPCANSNDH 480 NSSPNGNTMQ RQNTVNNGFN RDVIKQEDVA NARVYRID

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MDEFLDQIFS SSSWSDVSTV ERSSWGRNGL AQNDGLLTDC LGIFEGGEKN LLVNMPPSSQ  60
CMDKLATSYD FSKDLLTDEP QLLGEVFNRD IQSLYGAELV NAGNMNSSYM SMQSNMCPST  120
LDSLSRSSPE LVPVVSGSDQ SPCALRDSGS VGSNDSEASG IHPSIGESQS FTSIPQLWTR  180
PSYGGVPSLP PVIEQDKLQG FGLQGDFVET DANGFGIGDD KNLSVRNFNS LTSAQEELHG  240
LPSFVPNNQI PVARTHSQMQ LPQLGEGNPT AHYTDQNPVS QLPHSSVTPG GGCNGGIKPR  300
IRARRGQATD PHSIAERLRR EKIADRMKNL QELVPNASRA DKSSMLDEII EYVKFLQLQV  360
KVLSMSRLGA AGAVVPLITD GQPEGSGNLL LTGQEGYQSD SEDNAAFEEE LVKLMESNVT  420
AAMQFLQTKG LCLMPIALAG ALSSKKEASS PDSSEKKKPY FTNGHLPHNH NPPCANSNDH  480
NSSPNGNTMQ RQNTVNNGFN RDVIKQEDVA NARVYRID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	1e-53	bHLH family protein