PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430197.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 361aa MW: 41985 Da PI: 9.3892

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd+ll +++ ++G g W+ ++ + g++R++k+c++rw++yl XP_026430197.1 15 KGAWAEEEDQLLRKCILKYGEGKWRQVPTRAGLNRCRKSCRLRWLNYL 62 799*******************************************97 PP
2	Myb_DNA-binding	39.2	1.6e-12	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++ ++ XP_026430197.1 68 RGEFKEDEVDLIIRMHKLLGNR-WSLIAGRLP-GRTANDIKNYCNT 111 8999****************.*****.********886 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MESSSIISSE KGLRKGAWAE EEDQLLRKCI LKYGEGKWRQ VPTRAGLNRC RKSCRLRWLN 60 YLQPDIKRGE FKEDEVDLII RMHKLLGNRW SLIAGRLPGR TANDIKNYCN TRLKKTCFSR 120 YNTEKGKQVV VTKKSTGDDN TAHRDGQDHE HRKILKRRRL CPDISTIDHI DDKHMRTEVV 180 RPQPRTFKKS QWNMNNVPTP NNENITITTT RFPKNSQVVS ENATKCLPLL FDDHHDHFSN 240 NQQIYDNSTY WLKNILFGDT EEKEDSTTKK KKKKPKKKKR VTSNNNASSQ FESNTTKGVE 300 DGMANAKDSG GDNQHAYYCS FNEGKGLEED GNAGDNDNFW NNYLDDNLWH MLGEEHEQYL 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MESSSIISSE KGLRKGAWAE EEDQLLRKCI LKYGEGKWRQ VPTRAGLNRC RKSCRLRWLN  60
YLQPDIKRGE FKEDEVDLII RMHKLLGNRW SLIAGRLPGR TANDIKNYCN TRLKKTCFSR  120
YNTEKGKQVV VTKKSTGDDN TAHRDGQDHE HRKILKRRRL CPDISTIDHI DDKHMRTEVV  180
RPQPRTFKKS QWNMNNVPTP NNENITITTT RFPKNSQVVS ENATKCLPLL FDDHHDHFSN  240
NQQIYDNSTY WLKNILFGDT EEKEDSTTKK KKKKPKKKKR VTSNNNASSQ FESNTTKGVE  300
DGMANAKDSG GDNQHAYYCS FNEGKGLEED GNAGDNDNFW NNYLDDNLWH MLGEEHEQYL  360
I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	160	KRRRL
2	269	277	KKKKKKPKK
3	269	279	KKKKKKPKKKK
4	270	280	KKKKKKPKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-55	MYB family protein