PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430106.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 660aa MW: 75551.3 Da PI: 6.7914

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.9	1.4e-07	95	175	24	90
FAR1 24 rngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 g+ t+ t+ C + g ++++kk t++er+++ ++++gC +lk + d+kw+v+ eHnH+l XP_026430106.1 95 VPGRKTRITLGCERGGVFRHHTKKdqallefpgrtlapTVRERKRTGTKKCGCPFTLKGVWQPDDKWKVKVECGEHNHALE 175 456688999*****8777766679****************************99999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MEETPMEVET SGDIELFDPR KEYCATSVQN WGEEEDVVVN PEHEKRVSEV LKIDMADQFV 60 TDQVFNSRDE MIVWCQDVGR QNHMIVVIAK SEKPVPGRKT RITLGCERGG VFRHHTKKDQ 120 ALLEFPGRTL APTVRERKRT GTKKCGCPFT LKGVWQPDDK WKVKVECGEH NHALESTVVG 180 HSFAGRLRDD EKQVLKDMIR SGLKPKEVLT TLKKRSRGTN KSTMRTIYNA RAHLRMTEME 240 GRSEMQQVMK LLEEYHYVEW HIKDEETDEV QDVIWSHPDS IQLAKSFPSV LMINSTYRTS 300 RYHMPLSEII GVMSTGKTFT VAFLFMKAEI EERYTWALSQ LKTIYEPNAL PSVFVTSGVS 360 ALVSAIKTVF PKADHILCTF QISKTIMISC KHEFHNNEYS DSFLKDWEYL MQSETPVAFD 420 EGFASFESKW INYPTCVQYL RDNWLDLKEH FVSAWTNKVK HYGYTTTKTI EGAQEKTSRM 480 IGSSQGTFVS CWTEIHSSIT NEITTVKESL VDSLMSVKPS HNLPILKDLK NTVSHLALDM 540 LVAERSRGQS IDISGSSCEC SIRFTHGLPC AHEIQQFEHE GRPIALSDID PHWRKLVAVP 600 APIMPRNPDN LPEFDLFKQK WEISSETVRL TMLKKLKEIV TPPTTLPVLQ SPSANDSFTT

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MEETPMEVET SGDIELFDPR KEYCATSVQN WGEEEDVVVN PEHEKRVSEV LKIDMADQFV  60
TDQVFNSRDE MIVWCQDVGR QNHMIVVIAK SEKPVPGRKT RITLGCERGG VFRHHTKKDQ  120
ALLEFPGRTL APTVRERKRT GTKKCGCPFT LKGVWQPDDK WKVKVECGEH NHALESTVVG  180
HSFAGRLRDD EKQVLKDMIR SGLKPKEVLT TLKKRSRGTN KSTMRTIYNA RAHLRMTEME  240
GRSEMQQVMK LLEEYHYVEW HIKDEETDEV QDVIWSHPDS IQLAKSFPSV LMINSTYRTS  300
RYHMPLSEII GVMSTGKTFT VAFLFMKAEI EERYTWALSQ LKTIYEPNAL PSVFVTSGVS  360
ALVSAIKTVF PKADHILCTF QISKTIMISC KHEFHNNEYS DSFLKDWEYL MQSETPVAFD  420
EGFASFESKW INYPTCVQYL RDNWLDLKEH FVSAWTNKVK HYGYTTTKTI EGAQEKTSRM  480
IGSSQGTFVS CWTEIHSSIT NEITTVKESL VDSLMSVKPS HNLPILKDLK NTVSHLALDM  540
LVAERSRGQS IDISGSSCEC SIRFTHGLPC AHEIQQFEHE GRPIALSDID PHWRKLVAVP  600
APIMPRNPDN LPEFDLFKQK WEISSETVRL TMLKKLKEIV TPPTTLPVLQ SPSANDSFTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-18	FAR1 family protein