PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026430042.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 404aa MW: 45989.1 Da PI: 8.3887 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.2 | 1.4e-48 | 30 | 168 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++kve+k+l++ e+ik++diyk++PwdLp + ++ke+yfF+ r++ky+++ r+nr+t sg+Wkatg dk+++s+ XP_026430042.1 30 MLPGFRFHPTDEELVGFYLRRKVEKKPLSI-EIIKQIDIYKYDPWDLP-MSPVGDKELYFFCIRERKYKNSVRPNRVTGSGFWKATGIDKPIYSA 122 579***************************.89***************.445689***************************************9 PP NAM 96 .............kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl XP_026430042.1 123 vassgashtnnnnNKHCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 168 88888777665544445***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 404 aa Download sequence |
MMMMMNTDNT KNKLEDQIYN KNNADDEEVM LPGFRFHPTD EELVGFYLRR KVEKKPLSIE 60 IIKQIDIYKY DPWDLPMSPV GDKELYFFCI RERKYKNSVR PNRVTGSGFW KATGIDKPIY 120 SAVASSGASH TNNNNNKHCI GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP PVVAATGTSS 180 SAKLNTTIHH LNSKKISSST STHDQEAEIW TLCRVFKRTV ASYSITNKNK YPPTSHEYHK 240 EITINGTATN NNISSSTTTK SYSSPQQSFS MESENWSSSS TDQKFNYYTS GEYSTTSAQV 300 NSNNNQQERT INKTRPGGEV GTNNNQIHST ERDSSYLFPW ELMTDRITHH HQEAAVVLQQ 360 SNNISNFQNL HGTRSNDIFF LDYGIWDDLG SVISSDQALL YGYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G43000.1 | 4e-80 | NAC family protein |