PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429880.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 326aa    MW: 36422.2 Da    PI: 7.5802
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.65.3e-14136182455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h  +Er+RR+++N++f  L +++P +     kK++K ++Le A++Y+k+Lq
  XP_026429880.1 136 NHVVVERKRRHKLNQRFIALSSVVPGL-----KKMDKFSVLEDAIKYLKQLQ 182
                     7999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDVGTVSEFV APGDDITGLS FSYNQSFSSY PAAYMESTTT GQRPAKQLKT TDSWSSYMIV  60
TGTDHSNQHI ATPPEACSPS NFIISFSRNG HNSLTDHTLL ASQFCGNVVD NVNPKPKMVS  120
PRNKNTVFAS DVSYMNHVVV ERKRRHKLNQ RFIALSSVVP GLKKMDKFSV LEDAIKYLKQ  180
LQEKVKTLET VESVVFVKKT KVCADDNDSS SSNENSDAES TYDEPLPEIE ARVSDKNVLI  240
RIHCKKREGV LTKILTQIEK LHLSIISSNA IPFDDSSLAI TVTAQMNDEY SMTLKDLVKS  300
LRLSYLKGIM YFNNQPHCLC TTHSNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-45bHLH family protein