PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026429799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 282aa MW: 31900.3 Da PI: 4.945 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 121.5 | 4.7e-38 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC ++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp +r +a+ +++yeA+ar++dPvyG+v++i++lqqq+++l+++l XP_026429799.1 7 PCGACKFLRRKCLRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLTHLPVGDRCEAAVTIAYEAQARIQDPVYGSVAHIFALQQQVMSLQEQL 101 7*************************89******************************************************************* PP DUF260 95 allkee 100 +l+++ XP_026429799.1 102 TTLRAQ 107 998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MTGFGSPCGA CKFLRRKCLR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLTHLPVGD 60 RCEAAVTIAY EAQARIQDPV YGSVAHIFAL QQQVMSLQEQ LTTLRAQQAV QGFVNGGNNT 120 TSISDQIHQQ DIHNKLFYGD FPTYPQDIEA LNMQLNESKI LSEQLYPYNT CMNDSNNSTA 180 TTDDENMFYY EHGVVNTENS PSNQMSQEYH EHESFTPPEE TVHQFMTSAS FDEQYSSDEH 240 HQHAAMASIY LDDMQMNARK WIFQDTNQVD LQSMALAYLQ HP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58190.1 | 6e-61 | LBD family protein |