PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429728.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family BBR-BPC
Protein Properties Length: 337aa    MW: 37715.8 Da    PI: 9.8461
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind300.75.6e-9213371301
       GAGA_bind   1 mdddgsre..rnkg.yye...pa..aslkenlg..lqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllall 85 
                     mdd+g++   r++   y+   p+  + +k++++  ++ ms++ +rd++irernla+sek+aa+aerd a +qr++a++ern+a++erdn+++al+
  XP_026429728.1   1 MDDSGQHGngRHRHeSYKqfhPQppQLMKDDQAriMKFMSILGDRDTAIRERNLAISEKEAALAERDLAIMQRNAAISERNNAMMERDNAFAALK 95 
                     7777765446555544554554454566766543367888889**************************************************** PP

       GAGA_bind  86 lvensla......salpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkseks 174
                     ++ +s++       ++p++ ++ +g + ++++q+++++ +++ +++ r++++ +++ ++   +e+ +     +     ++k+  +++ + +++ s
  XP_026429728.1  96 YKLKSSVigssvsPTCPSEFDIARGMTYMHHIQHMQQNPMAKASYNPRQMHIHDNTSLSAVMPESPKPGPGGRPV---ENKVISSSEMTASKPPS 187
                     *999888898887899******************99999*******9****999999999888877765544332...22222222222222233 PP

       GAGA_bind 175 kkkvkkesader......................skaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPv 246
                     +k+ k+e++  +                        +++ +++  +l +v++D s++ +PvC CtGal+qCY+WG GGWqS CCt t+SvyPLPv
  XP_026429728.1 188 RKRAKREGEGLKkpatvantyeqlmfgngsgeeeEDQQWTKLEQrGLKQVNFDASNMLPPVCLCTGALQQCYRWGKGGWQSVCCTKTLSVYPLPV 282
                     333333333322234556667789********9977777777666************************************************** PP

       GAGA_bind 247 stkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     + ++r +Ri+grKmS+gaf+kl+++L+aeG+dls p+DLkdhW +HGtn++ ti+
  XP_026429728.1 283 MDNKRSSRIGGRKMSGGAFTKLVSRLSAEGHDLSLPLDLKDHWSRHGTNRYSTIK 337
                     ******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDDSGQHGNG RHRHESYKQF HPQPPQLMKD DQARIMKFMS ILGDRDTAIR ERNLAISEKE  60
AALAERDLAI MQRNAAISER NNAMMERDNA FAALKYKLKS SVIGSSVSPT CPSEFDIARG  120
MTYMHHIQHM QQNPMAKASY NPRQMHIHDN TSLSAVMPES PKPGPGGRPV ENKVISSSEM  180
TASKPPSRKR AKREGEGLKK PATVANTYEQ LMFGNGSGEE EEDQQWTKLE QRGLKQVNFD  240
ASNMLPPVCL CTGALQQCYR WGKGGWQSVC CTKTLSVYPL PVMDNKRSSR IGGRKMSGGA  300
FTKLVSRLSA EGHDLSLPLD LKDHWSRHGT NRYSTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.16e-93BBR-BPC family protein