PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026429429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 181aa MW: 20142.1 Da PI: 10.6 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48.8 | 1.3e-15 | 20 | 72 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR+++N+ ++ Lr+llP + + kKls ++ k+v+YI +Lq XP_026429429.1 20 KKLNHNASERDRRKKLNNLYSSLRSLLPGsD---HTKKLSIPVTVSKVVKYIPDLQ 72 6789*************************44...6666****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 181 aa Download sequence |
MPSSSGRNGA MSTDITSTVK KLNHNASERD RRKKLNNLYS SLRSLLPGSD HTKKLSIPVT 60 VSKVVKYIPD LQKQVDKLIQ GKEEILTSIS KQQTAGGGDR LRDSKSRKVL AVKKQSLPTV 120 SANRVDDREV VIQICSLKVN IPLLSEVLLN LEREDFRVLN ASAFDSSGDR VFYNLHLQLL 180 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56970.1 | 3e-40 | bHLH family protein |