PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429427.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 227aa    MW: 25334.9 Da    PI: 10.0192
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.22e-152072155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++ k+v+YI +Lq
  XP_026429427.1 20 KKLNHNASERDRRKKLNNLYSSLRSLLPGsD---HTKKLSIPVTVSKVVKYIPDLQ 72
                    6789*************************44...6666****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MPSSSGRNGA MSTDITSTVK KLNHNASERD RRKKLNNLYS SLRSLLPGSD HTKKLSIPVT  60
VSKVVKYIPD LQKQVDKLIQ GKEEILTSIS KQQTAGGGDR LRDSKSRKVL AVKKQSLPTV  120
SANRVDDREV VIQICSLKVN IPLLSEVLLN LEREDFRVLN ASAFDSSGDR VFYNLHLQVK  180
DTQSLECEVL NEKLLSCVEN KSFSHNYVTD DHSLNKEGVA HVKPIPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.19e-44bHLH family protein