PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026429348.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 526aa MW: 61114.6 Da PI: 7.0524

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026429348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.5	2.9e-20	103	184	3	89
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++Y+k++GF vrk++++k+ +g i + ++C+++gk++ +++ ++++++r+gCka l+ ++ + +kwev++++ HnH + XP_026429348.1 103 YKRYGKRLGFAVRKKTHRKN-GEGFIRSVSYCCNRQGKPSVNRNP----AKQNKTNRCGCKAGLTARLINGDKWEVSTFHALHNHLV 184 9*************9998.8888***********99877....89999*****************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MGLQVENHPW LALIYVGVNQ GSIILIIIDS LDIVSPCKYK QRLTNNFNYI TDNEDVDEDD 60 EDFEFSGTDE VEEAEEGDDD ECIDNEIHAG KIFATIREIE LAYKRYGKRL GFAVRKKTHR 120 KNGEGFIRSV SYCCNRQGKP SVNRNPAKQN KTNRCGCKAG LTARLINGDK WEVSTFHALH 180 NHLVVSPSKI RMMPCYRDVP PNVKHRLDAY DQSGIKMHKS YISIVNDHRG YNNMTCTEKD 240 CRNIIKELRA LRLGEGAATA IIRYFMNKVS QKSNEHLDFY YAVDVDEEKH LKNVFWADSW 300 CREAYKEFGD VVSFDTTYLT KKYNMPFAPF VGVNHHGQSI LLGCGLLSDE QEETFVWLFN 360 EWMKCMSGCP PRAIITDQAK AMQNAIKIVF PAARHRWCIW HIMSKVPEKF AMYSKREKII 420 STLQELIYDT QTPAEFETRW QKMLQKYSLE ANKWLSDLYD DKERWIPCFV NDIFWAGMSS 480 TQRSEGMNAF FGGFLQPKTS LKQFVEQFEQ ALRKEVEKSW LQMPSH

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MGLQVENHPW LALIYVGVNQ GSIILIIIDS LDIVSPCKYK QRLTNNFNYI TDNEDVDEDD  60
EDFEFSGTDE VEEAEEGDDD ECIDNEIHAG KIFATIREIE LAYKRYGKRL GFAVRKKTHR  120
KNGEGFIRSV SYCCNRQGKP SVNRNPAKQN KTNRCGCKAG LTARLINGDK WEVSTFHALH  180
NHLVVSPSKI RMMPCYRDVP PNVKHRLDAY DQSGIKMHKS YISIVNDHRG YNNMTCTEKD  240
CRNIIKELRA LRLGEGAATA IIRYFMNKVS QKSNEHLDFY YAVDVDEEKH LKNVFWADSW  300
CREAYKEFGD VVSFDTTYLT KKYNMPFAPF VGVNHHGQSI LLGCGLLSDE QEETFVWLFN  360
EWMKCMSGCP PRAIITDQAK AMQNAIKIVF PAARHRWCIW HIMSKVPEKF AMYSKREKII  420
STLQELIYDT QTPAEFETRW QKMLQKYSLE ANKWLSDLYD DKERWIPCFV NDIFWAGMSS  480
TQRSEGMNAF FGGFLQPKTS LKQFVEQFEQ ALRKEVEKSW LQMPSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-92	FAR1 family protein