PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026429193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | WRKY | ||||||||
Protein Properties | Length: 231aa MW: 26138.8 Da PI: 6.5886 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.9 | 1.3e-25 | 16 | 76 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 ++Dgy+WrKYG K++ g+++pr+YYrCt++ gC ++++v+r+++d++++ ++Y g+H++ XP_026429193.1 16 VNDGYSWRKYGHKDIYGAKHPRGYYRCTHKnsqGCLATRQVQRTDTDTSIFSVMYLGRHTC 76 58***************************98889*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MEQVRACEQS GLEEPVNDGY SWRKYGHKDI YGAKHPRGYY RCTHKNSQGC LATRQVQRTD 60 TDTSIFSVMY LGRHTCVQAS RLQPGQPQKK VEQHDKKRKR KSQETLINFQ TGGHANTNDY 120 DTTQVVLRSP SFSFPSAPVP IPCQQKESNS NICSSHLTPD NHFMSSSLSS PSTSGSNSIF 180 SPYRVNNIES GHDLQTSDYD LCEFESALPL ALDSSDLYLD WDWDSFDGFC F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 101 | KKRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 4e-30 | WRKY family protein |