PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429095.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 392aa    MW: 42675.8 Da    PI: 4.8964
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12190237254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r +h e+Er+RR+++N+ f eLr+++P+       +++Ka+ L  +  YI++L
  XP_026429095.1 190 RLSHMEAERQRREKLNQLFYELRSVVPNV-----SRMDKASLLSDTLSYINEL 237
                     889*************************6.....49**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MENCSFLYAP SSSAISAPNS CSISTGSASI WLATVLKELG EFPCDRANPD EAAAQLHGCG  60
LNVLVNDPIS TSTTLEDMVN SGSSSSSSDL EAPKQDLIQG QANESVIGEV KHVSSFGVSD  120
MDSLMCSMND YCSQQFGFDG YSPVVADPNV CGLVVNDDDD GKIIDEITTS PTPKNKNKRG  180
RSNSNSGGGR LSHMEAERQR REKLNQLFYE LRSVVPNVSR MDKASLLSDT LSYINELKRK  240
VDKLVADQQA KLRGSKEPLN SKTTTMTKTS GESIVNDDGN DVSDRNSTSD NADGGRVDMT  300
SMKNMEIDVK MMMDSHAMIR VISEDVKHSS AGLMNALREL EFQVQHASIS RVKDQMLQDV  360
MVRLPENSVK TISTEEGVKA AVFAKLKKQR FT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46760.12e-33bHLH family protein